Camelina sativa (false flax): 104755153
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Entry
104755153 CDS
T05044
Name
(RefSeq) phytochrome A-like isoform X3
KO
K12120
phytochrome A
Organism
csat
Camelina sativa (false flax)
Pathway
csat04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104755153
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
PAS_9
HATPase_c
PAS_4
HisKA
PAS_8
PAS_3
Yop-YscD_ppl_3rd
Motif
Other DBs
NCBI-GeneID:
104755153
NCBI-ProteinID:
XP_010475795
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Position
17:complement(3912290..3918525)
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AA seq
1014 aa
AA seq
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MTSHAVPSVGEHPVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNLILVHCKTSAKPFY
AIVHRVTGSIIVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQ
EVFELTGYDRVMAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVR
MIVDCNAKHARVLQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDG
EGDAPDSTAQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQI
VEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHL
QEIASWLCEYHTDSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAG
EVRWGGAKHDPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFK
DGETTDVNTKVIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTK
IAELTGLSVDEAIGKHLLTLVEDASVEIVKRMLENALEGTEEQNVQFEIKTQLTRADAGT
ISLVVNACASRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFG
TDEFGWCTEWNPAMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNA
VTSQDPEKVSFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRL
AERTAVKRLKALAYIKRQIQNPLSGIIFTRKMIEGTELGPEQIQILQTSALCQKQLSKIL
DDSDLESIIEGSLDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLFGD
SIRLQQVLADFMLMSINFTPSGGQLTVTASLRKDQLGRSVHLAYLEIRLTHTGAGIPEFL
LNQMFGTEEDVSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIISAELAAANK
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtcatgcagttcctagtgttggcgaacaccctgttctaggcattgggacagat
ataaggagtcttttcactgctcctagtgcctctgcattgcagaaagcccttggatttgga
gatgtctccttgttgaatctcattcttgtgcactgcaagacttctgcaaagcccttttat
gcgattgtccacagggttacagggagcatcatcgtcgactttgaaccggtcaagccttat
gaagttcccatgacagctgctggtgccttacaatcatataagctcgctgccaaagcaatc
actagactgcaatctttgcccagtggaagcatggaaaggctttgtgatacaatggcacag
gaggtttttgaactcacggggtatgacagggtgatggcttataaatttcatgaagatgat
cacggtgaggttgtctccgaggttacaaaacctgggctggaaccttatcttggtctgcat
tatccagccactgacatccctcaggcagcccgttttctgtttatgaagaacaaggtccgg
atgatcgttgattgcaatgcaaaacatgctagggtgcttcaagatgaaaagctttccttt
gatcttaccttgtgtggctctaccctcagagcaccgcacagctgccatttacagtacatg
gccaacatggattcaattgcatctctggttatggcggttgtagttaatgaggaagatgga
gaaggggatgctcctgattctactgcacagcctcagaagagaaagagattatggggttta
gtggtttgtcataatacgactccgaggtttgttccatttcctctcaggtatgcctgcgag
tttctagctcaagtgtttgccatacacgtcaataaggaggtggaactggagaaccagatt
gtggagaagaacattttgcgcacacagacactcttgtgtgatatgctgatgcgtgatgct
ccactgggtattgtgtcgcagagccccaacataatggaccttgtgaaatgtgatggagca
gcactcttgtataaagacaaggtatggaaactgggaacaactccaagtgagttccatctg
caggagatagcttcatggttgtgtgaataccacacagattcaacaggtttgagcactgat
agtttgcatgatgctgggtttccgagggctctgtctcttggggactcggtatgtggaatg
gcggctgtaaggatatcgtcgaaagacatgattttctggttccgttctcataccgctggg
gaagtgagatggggaggtgccaagcatgatccagatgatagggatgatgcaagaagaatg
cacccgaggtcatcgttcaaggctttccttgaagtggtgaagacaaggagtttaccttgg
aaggactatgagatggatgcaatacactccttgcagcttattctgaggaatgctttcaag
gatggtgaaactactgatgtgaatacaaaggtcattcactctaagctgaatgatctcaaa
attgatggtatacaagaactagaagctgtgacgagtgagatggttcgtttaattgagact
gctacggtgccaatattggcggttgattctgatggattggttaatggctggaacacgaaa
attgctgagctgactggtctttcggttgatgaagcaattgggaagcatctcctcacactt
gttgaagatgcttcggtggaaatcgttaaaaggatgctagagaatgcattagaaggaacc
gaggagcagaatgtccaatttgaaatcaagacacaactgaccagggctgatgctgggaca
ataagtttagttgtaaatgcatgtgcaagtagagatctccatgaaaacgtggtaggggtg
tgttttgtagcccatgatcttactggccagaagactgtgatggacaagtttactcggatt
gaaggtgattacaaggcgattatccaaaatccaaacccgctgatcccgcccatatttggc
accgatgagtttggatggtgcacagagtggaatccagcaatgtcaaagttaaccggtttg
aagcgagaggaagtgatagacaagatgctcttaggagaagtctttgggacgcagaagtca
tgttgtcgtctaaagaatcaagaagcttttgtaaaccttgggattgtgctgaacaacgct
gtgaccagtcaagatccagagaaagtgtcgtttgctttctttacaagaggtggcaagtat
gtagagtgtctgttgtgtgtgagtaagaaactggacagggaaggtgtagtgacaggtgtc
ttctgtttcctgcaacttgccagccatgagctgcagcaagcgcttcatgttcagcgtcta
gctgagagaaccgcagtgaagagactaaaggctctagcatacatcaaaagacagatccag
aatccgctatctgggattatctttacaaggaaaatgatagagggcactgaattaggacca
gagcagatacagattttgcaaactagcgcgttatgtcagaagcaactaagcaagatcctt
gatgattcggatcttgaaagtattattgaagggtctttggatctggaaatgaaagagttc
agcttaaacgaagtgttgactgcttccacaagtcaagtaatgatgaagagtaacggaaag
agcgttcgaataacaaatgagaccggagaagaagtaatgtctgatactttgtttggagac
agtattaggcttcaacaagtcttggcagatttcatgttgatgtctattaactttacacca
tccggaggtcagctaactgttacagcttccttaaggaaggatcagcttgggcgttctgtg
catcttgcttatttagagatcaggttaacgcatacgggagctgggatacccgagttttta
ctaaaccaaatgtttggaactgaggaagatgtgtcagaagaaggattgagcttgatggtt
agccggaaactggtgaagctgatgaatggagatgttcagtacttgagacaagctgggaaa
tcaagtttcattatctctgcagaactcgctgcagcaaacaagtag
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