Camelina sativa (false flax): 104755259
Help
Entry
104755259 CDS
T05044
Name
(RefSeq) paired amphipathic helix protein Sin3-like 6
KO
K11644
paired amphipathic helix protein Sin3a
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104755259
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
104755259
REST complex
104755259
Heterochromatin formation proteins
Other heterochromatin formation proteins
104755259
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Dala_Dala_lig_N
Motif
Other DBs
NCBI-GeneID:
104755259
NCBI-ProteinID:
XP_019095238
UniProt:
A0ABM1R8A0
LinkDB
All DBs
Position
17:4411116..4427818
Genome browser
AA seq
1119 aa
AA seq
DB search
MKRLRDGVQPEPQPQKRRTEVSSRGETPKTLDALTYLKSVKEIFHDNKEKYESFLELMKD
FKAQRIDTEGVIERIKELFKGYKNLLLGFNTFLPKGYKITLQPEEEKPKVRVDFKDAIGF
VTKINTRFGDDERAYKSFLDILNMYRKERKSISEVYKEVTMLFKGHEDLLMEFVNFLPNC
PEPAASAKKAVQRHKGTATSPMHSDKKLKLRCKLEDNSEHSDQREDGDENLVACSPDSLV
KEGHPGDFQDDENREDTETDTADRTEKSAASGSKDIGNHKPTTPYVGTPINELDLSECTQ
CTPSYRLLPKDYAVEIPSYRNTLGKKTLNDHLVSVTSGSEDYSFSHMRKNQYEESLFRCE
DDRYEMDMLLGSVSSAITHVESLLEKMNNNTISVDTNICIEKHLSAMNLRCIERLYGDNG
LDVMDLLKKNMHSALPVILTRLKQKQEEWARCHSDFQKVWAEVYAKNHHKSLDHRSFYFK
QQDSKNLSTKCLVAEIKDISEKKHQEDLLQAIAVRTMPSFTPDLEFDYCDTQIHEDLYLL
IKYYCEEICATEQSDKVMKLWITFLEPMFGTLSRSQGDLAMEDVSKLKTNQELHDACVAV
KDSSSGSKGKHPISPKLLKDNPTMQGSSPGKDVSANIMKAAQHDKLQDDTDMSYEVSQST
KLVSARNDQIMEDVSVGNHEAEREEGELSPTNSCEQGNFDVSGQNGLKPLQRVMDNVTSN
TDQQSCDKKGAYCTETGTKGNTHPEDDENCHKLSEDNETASEKVVSGTKSGCHEKHKERI
SVAGEVANGKEGEDGSFAFTERFLQTVKPVAKHVSLPLQASETCSQNDSRVFYGNDSYYV
LFRLHQMLYERIQSAKKHAEKKWKAPDNTTPDSYPRFIDALYNLLDGSSDNTKFEDECRA
IFGAQSYVLFTLDKLVQKFVKHLHAVAADETDTKLRQLHAYENYRKLGRFVDLVYHENAR
ALLHEANIYRIRYSSAKTRLSIQLMNCGNNQPEVAGVAMEPDFANYLQKKFLTSVNDDEN
HGLFLKRNKEKFTRVNESSGDTIAMEGLSIINEIECKMACSSSKVKYVANTSDLLYRSKQ
GKPNSKGPRLKRVSEISKERRISRFHIMLNCKLCGLHPI
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacttagagacggtgttcaacctgaacctcaacctcaaaagcgaaggactgag
gtttcatctcgaggagaaacacctaaaacccttgatgccctgacgtatctcaaatctgtt
aaggaaatttttcatgacaataaagagaaatatgagtcattccttgagctcatgaaggac
tttaaagctcagagaatcgacactgaaggtgtcatagaaaggattaaagaattgttcaag
ggttacaagaacctacttttaggttttaatactttcttgcccaaagggtataaaataacc
cttcaaccggaggaagagaaacctaaggtccgggtggatttcaaagacgctatcggtttt
gtcaccaagattaatacgaggttcggagatgatgaacgtgcgtacaaaagttttctagac
atcctgaatatgtatagaaaggaaagaaagtccatctctgaggtctacaaagaggttacc
atgttattcaagggtcatgaagatctgctcatggagttcgttaatttcttacctaattgt
ccagaaccagctgcttcagcaaagaaggcagtacagcgtcacaagggcactgcaacttct
cccatgcattctgataagaaactaaaactgcgatgtaagcttgaggataattctgaacac
tctgaccaacgagaagatggtgatgagaaccttgtcgcttgttcccctgactcccttgtc
aaagaaggtcatccaggagattttcaagatgatgaaaatagagaagatactgaaacagat
acagcagatagaactgaaaaaagtgcagcatctggcagtaaagatatcggaaatcacaaa
cccaccaccccgtatgtgggaacacctataaatgaacttgatctctctgaatgcactcag
tgtacgccaagttatcggctcctgccaaaggattatgcagttgagattccaagctacaga
aatacacttggtaaaaagacactcaatgaccacctggtatctgtcacctccgggagtgaa
gattactcattcagtcatatgcgcaaaaaccagtatgaagaaagcttatttcggtgtgag
gatgataggtatgaaatggacatgttactaggatctgtaagttcagcaatcacacacgtg
gaaagccttctggaaaagatgaacaacaacactatctcagtagacactaatatatgtatc
gagaaacacttatcagctatgaacttaagatgcattgagcggttatacggtgataatggg
cttgatgtcatggatcttttgaagaagaacatgcatagtgctttaccggtgatactgacg
cgcttgaagcagaagcaagaagaatgggcaaggtgccactctgatttccagaaagtttgg
gctgaagtatatgctaagaatcaccacaagtcactagatcatcgtagtttctatttcaag
cagcaggactctaagaacttgagcacaaaatgtttagtggcagagataaaagatatcagt
gagaaaaagcatcaagaagatctgcttcaagctattgctgttagaactatgccctctttt
actccggatttggagtttgattattgtgatacacaaattcacgaggatttatatctgcta
atcaagtattactgtgaagaaatatgtgccactgaacaatcagataaggtaatgaagctg
tggataacctttttggagcccatgtttggcactctttcgaggtctcaaggtgaccttgct
atggaagatgtatcaaagttgaaaaccaaccaagaattgcatgatgcatgcgtggcagtg
aaggacagctcttctgggtcaaagggtaaacatccaatatccccaaaactgctgaaagat
aatccaacaatgcaaggaagctcgcctgggaaagatgtctcagccaatataatgaaagct
gctcagcatgataaactgcaagatgatacagatatgtcttatgaggttagtcagtctacc
aaacttgtgtcagccagaaacgatcagataatggaggatgtatcagtgggaaatcatgag
gctgagcgagaagagggtgaattatctcccactaacagttgtgagcaaggcaactttgat
gttagcggacaaaatggcctcaagcctttacaaagggtgatggacaatgtaacaagcaat
acagaccagcaaagttgtgataaaaagggagcatattgcactgaaacgggaacaaaggga
aatactcaccctgaagatgacgaaaattgtcacaagttatcagaggataatgagaccgcc
tctgaaaaggttgtttcaggaaccaagtctggttgtcatgaaaagcataaggagcgtatt
agtgtggctggagaggtggctaatggaaaagaaggtgaagatggatcctttgcatttaca
gagcggtttctgcaaactgtaaaacctgttgccaagcatgtgtctttgccactgcaagct
agtgaaacttgctctcagaatgattctcgagttttttacgggaatgattcttattatgtg
ctatttaggcttcatcaaatgttgtatgagagaatacaatcagcaaagaaacatgcagaa
aagaagtggaaggctccggataacacaactcctgattcgtatcccaggttcatagatgca
ctgtataatttacttgacggctctagtgacaatacaaagtttgaagatgaatgccgagct
atttttggagcacagtcatatgttcttttcacattggacaagttagttcagaagtttgtt
aagcatctgcatgctgttgcagctgatgagacagacaccaagcttcgacaactacatgcg
tatgagaactacagaaaactggggagattcgttgatctagtgtatcatgagaatgcacgt
gccctcctccatgaggcaaacatataccggatcagatattcatcagcaaaaacacgtctc
tctattcagcttatgaactgcgggaataaccagcctgaagtagctggtgtagccatggag
ccggattttgcaaattatctacaaaaaaagtttctgacatccgtcaatgatgatgagaat
catggactgtttttgaaaaggaacaaggagaaattcactcgtgtaaatgaatcttcgggg
gatacaattgcaatggaaggattgagtattattaacgagattgaatgtaaaatggcttgc
agttcttcaaaggtgaagtatgtagcaaacacatcagatcttttgtatagaagcaaacag
gggaaaccgaattcaaagggaccgaggcttaaaagagttagtgaaatttcgaaagagaga
agaatatcgcggtttcacattatgctgaattgcaaactttgtggtttgcatcctatataa
DBGET
integrated database retrieval system
