KEGG   Camelina sativa (false flax): 104755355
Entry
104755355         CDS       T05044                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csat04812]
    104755355
Cytoskeleton proteins [BR:csat04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     104755355
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SPT8 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_DCAF4 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_IFT140_1st eIF2A WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_VPS8 VPS8_N PROPPIN DUF6563 Ge1_WD40 TPR_21
Other DBs
NCBI-GeneID: 104755355
NCBI-ProteinID: XP_010476017
LinkDB
Position
17:4936002..4942458
AA seq 1008 aa
MANRGYNLQEFVAHSGNVNCLSIGKKSSRLLLTGGDDYKVNLWSIGKTTSLMSLCGHTSP
VDSVAFNSKEVLVLAGASSGVIKLWDLQEAKMVRAFTGHRANCSAVEFHPFGEFLASGSS
DTNLRVWDTRKKGCIQTYKGHTRGISTIKFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF
KFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRAITFHPDGQT
LFCGLDDGLKVYSWEPVICRDGADMGWSTLGDLCINGGKFIGCSYYRNSIGIWVSDISQL
EPYEAGSEDKKGSMVKRFSVLDDQSSERMGNGPRCSSSPDYETREIKNIYVDSTGGNLNV
AQNTGSLKVTLPLESGKVATMASEKQDATYFGQTGDKYSSMHSVVSRDSDSGEESSYPER
ESITFSRTKSGMLLRPAHVRKALAKFEESKQSVVVQSRTRKNSGLDVQEEPLTRSLFLSE
QSGSKPFDAEESTIKGITDKFEKVLSSEPPTDEANRMLLKPPRVQRSSNSEYHESKRAIS
VDSGTSDNSKTGLEHSRDYDLPADTEHPGGSRELNPMKIVEGVKVVSGRTRSLVERFERG
EKSTHTEAASTTIAQNTNAVQEDPHTTSRQTGQTAVISTRRARSTPARVMPVVLNRDSNM
TSNEPPLTQPARTSSVPVIFSQATSVTYDEPSVTQQSRTSPSRRLPVTINQATNIASNEA
SVTSRRPRRTSSARVKHTSLSQAMDMTSHECPVTSSRSSRISPARGMPTKLNQSYVTSDT
SYIASRHRISPTTMLATPTVIDQVADMALNETHVAQIQPACENLPQKEEPQISGRENDSE
ITDTLMQTHDEFLSTLQSRLAKLQIVRHFWERSDVKGAIEALRKLTDQSVQADVISILTD
KIEILTLDMFSQLVPVLTSLLGSRTERPVNVSLDMLLKLVAVFGTVIRSTVSAPRIVGVD
LHADERLQICQICSAGLHKIQRILLVLARRGGLITRKAQELNLVLQEP
NT seq 3027 nt   +upstreamnt  +downstreamnt
atggcgaatcgtggttataacctgcaggagtttgtggcacattccggaaatgtgaattgt
ctaagtatcggaaagaagtcatcacgtcttcttcttactggtggagatgattacaaggtc
aacctttggtctatcggcaagaccacttcgctaatgagtctttgtgggcatacaagcccg
gttgactcagtagctttcaactccaaagaagttttggtgctagctggagcttcttcaggt
gtgataaagctgtgggatctacaagaagcaaagatggttcgagcttttactggacataga
gccaactgttctgctgttgagtttcatccatttggtgaatttcttgcatccggatccagt
gacacaaatctaagggtttgggataccagaaagaaggggtgcatccaaacatacaagggt
catactcgtggcattagcactatcaagtttagtcctgatggtcgttgggtagtttctgga
ggacttgacaacgttgtaaaggtatgggatttgactgctggaaagctcttgcatgagttt
aagtttcatgaaggacctatccgttccctagacttccatccacttgagtttctcctagcc
acaggttctgctgacaggactgtgaaattctgggatctggaaacgtttgaactgattgga
tctactagaccagaggctactggagttcgtgcaatcacttttcatccagatgggcaaact
cttttctgtggattggatgatggcttaaaggtttattcatgggaaccagtgatttgccgg
gatggagctgatatgggatggtcaacacttggtgacttatgcatcaatggaggaaagttc
attggttgttcatactaccgaaattctattgggatttgggtctcagatatatcgcaactt
gagccatatgaagctggatctgaggataagaaaggaagcatggtgaaaagattcagtgtc
ttggatgatcagtcgtctgagagaatgggaaatggtccaaggtgcagttcatccccagat
tatgagacaagagagataaagaacatatacgttgactccacaggtggaaatttgaatgtt
gcgcaaaatacaggatctctgaaagtgacattgcctttggaatcaggaaaagtagctact
atggcgagtgagaagcaggacgcaacatattttggacaaacaggagataagtattctagt
atgcatagtgttgtatctcgagatagtgatagtggagaggaatcttcttatccagaaagg
gaatctatcactttctcaagaactaaatcgggtatgttgctaagaccagctcatgtaaga
aaggcgctagcaaagttcgaagaatcaaagcagtcagtggttgttcaatccagaactcgg
aagaacagcggacttgatgttcaagaggagccactcactcgaagtttgttcctttcagaa
cagagtggtagtaaaccatttgatgcggaagagtctaccatcaagggtattacagacaag
tttgaaaaagttttatcatcggaaccaccaactgatgaagcgaatcgtatgcttcttaaa
ccacctcgtgtacaaaggtcatcgaatagcgagtatcatgagtcaaaacgagcaatatct
gttgattctggtacttctgacaacagcaaaactgggttggagcactctagagactatgac
ttgcctgcagacactgaacaccctggaggcagtagagaattaaatcccatgaagattgtt
gaaggagtaaaagttgtctcagggaggacacgctcgttggttgagaggtttgagagagga
gaaaaaagtactcataccgaagcagccagtaccaccatagctcaaaacactaatgcggtg
caggaagatccgcatacaacatcaagacagacaggacaaacagctgtaatatcaacacga
cgagctaggagtactccagccagagtgatgcctgttgttctcaatagggatagtaacatg
acatctaatgagcctcctttaacacaaccagctaggacttcttccgttccagtgatattc
agtcaagctactagtgtcacatatgatgagccttctgtaacacaacaatctagaacttct
ccctcccggagattgcctgtgacaatcaatcaggcgacaaatatcgcatctaatgaggct
tctgtaacatcaaggcgaccacgcaggacttcttcagcacgagtaaagcatacgtcactc
agtcaggcaatggacatgacatctcatgagtgtcctgtaacatcatcacgttcatctagg
atttctccagcccgtggaatgcccacaaaactaaatcagtcttatgtgacatctgataca
tcttatatagcatccaggcaccgaattagtccaactacaatgctggctacacccactgtg
attgatcaggtagccgacatggcgctgaatgagacacatgtagcacaaattcaaccagct
tgcgagaacttaccgcagaaggaagagcctcaaatatctgggagggaaaatgatagtgaa
atcactgatactctaatgcaaactcatgatgagttcttaagcactcttcaatcgaggttg
gcaaagttacaaattgtaagacatttttgggagcgtagcgatgttaaaggcgccatcgag
gcattgagaaagctgacagatcagtctgttcaagcagatgtgatcagtattctaaccgac
aaaatagaaattctcacattggatatgttttctcaattggtccctgtcctaacaagctta
ttgggtagcaggacagagaggccggtaaatgtctccttggatatgctcttgaagcttgta
gcagtgttcggtacagttatacgctcaactgtctcagctccacgaattgtcggcgttgat
cttcatgcagatgaaaggctacaaatctgccaaatatgttctgcgggattgcacaagatt
caaaggattcttctagttctcgcaagaagaggcggtctaataacaagaaaggctcaagaa
ctaaacctagttcttcaggagccataa

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