Camelina sativa (false flax): 104755601
Help
Entry
104755601 CDS
T05044
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
csat03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104755601
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104755601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104755601
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104755601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104755601
NCBI-ProteinID:
XP_010476310
UniProt:
A0ABM0WUE5
LinkDB
All DBs
Position
17:6043255..6046016
Genome browser
AA seq
578 aa
AA seq
DB search
MTEDNVDYGGNQKILHQGSGTIPALADEELMGDDDEYDDLYSDVNVGESFYQAHNPPQPP
PAQVGVTGNPSLQAQNTTTSVAAEPRMGIVSGGTVEGKYRNDGGHNGISVPETRSDVYPQ
ASSFGAKGLNIDMQSNNKIVQQGSTSIVLNNHGFSGNAVNVPEMPVHNSYGAVPQGAQQI
PVSQMSVIPNVMVNKSPTQSFVVDNGNTMLFVGELHWWTTDAEIESILSQYGRVKEIKFF
DERVSGKSKGYCQVEFYDSAAAAACKEGMNGYIFNGKACVVAFASPETLKQMGANFTGRN
QGQNQIQNRRPMNEGMGRGNNNNNMNTQNGDGGRNYGRGGFARGGQGMSNRGGPWGGAMR
GRGVNNMTSGSNAGPYGPGLAGPAFGGMMHPQGMMGPGGFDPTFMGRGGAYGGYSGLAYP
GMPHSYPGVNAMGMVGIAPHVNPAFFGTGMGTMGSSGMNGVHAAAMWSEANGGGGEEGGS
EYGGYEDETQEKEEKPSRDKERSTTEREWSESSGDRRHKSHREEKDSHREYKQQRDRDSD
EFDRGQSSMKSRSRSRMAEDDHRSRSRDADYGKRRRGD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagacaacgttgactatggaggtaaccagaagatattacatcaaggaagcgga
actatacctgctctagcggatgaagaacttatgggagatgatgatgagtacgatgatctg
tatagcgatgttaatgttggtgagagtttctaccaagctcataatccacctcaaccacca
ccagctcaagtcggtgttacaggtaatccaagtcttcaagctcagaatactactactagt
gttgctgctgaaccgagaatggggattgtatctggaggtactgttgaagggaagtatcga
aatgatggagggcataatggaatcagtgtaccagagacaaggtctgatgtttatccacaa
gcatcttcttttggagctaaagggttgaatattgatatgcaatccaacaacaaaatcgtt
caacaaggatcaacatctattgtgttaaacaaccatggattttcaggtaacgctgtgaat
gtgcctgagatgcctgttcataactcttatggtgctgttcctcaaggtgctcagcagatt
cctgttagccagatgagtgtgattccgaatgtaatggtgaacaaaagccctacgcagtca
tttgttgtggacaatggaaacaccatgctttttgttggagagttacactggtggacgacg
gatgcagagattgagagtattctttcacagtatggaagagtcaaagagatcaagtttttc
gatgagagagttagtggcaaatctaaagggtattgtcaggttgagttttatgattcagct
gctgcagccgcttgtaaagaaggaatgaatggttatattttcaacggtaaagcatgtgtt
gttgcctttgcttctcctgaaacactgaagcagatgggagctaatttcactgggaggaac
caaggacaaaaccaaattcaaaacagaaggcctatgaatgaaggaatgggaagaggtaat
aacaacaacaacatgaatacgcaaaatggtgatggtggaagaaattacgggagaggtgga
tttgcgcgtggtggacaaggaatgagcaaccgtggaggtccctggggtggtgcaatgaga
ggtagaggggtgaacaacatgactagtggttctaatgctggaccgtatggacctggacta
gctggtcctgcatttggtggtatgatgcatccacagggtatgatgggacctggtgggttt
gatccaacattcatgggtcggggtggtgcttatggagggtattcaggtcttgcttaccct
gggatgcctcattcttatcctggtgttaatgcaatgggaatggttgggattgctcctcat
gtcaatcctgccttttttggcacgggaatgggaacgatgggtagctcagggatgaatgga
gttcatgcagcagcgatgtggagcgaggctaatggaggtggtggtgaagagggtggttct
gaatatggtgggtatgaagatgaaacccaagagaaagaagaaaagccatcacgagataaa
gaacggtccaccacggaacgtgagtggtctgagagcagtggtgatagaagacacaagagt
catcgtgaagagaaagatagtcaccgtgagtataagcagcagagagaccgtgattctgat
gagttcgatagaggacaatctagtatgaaatctcgaagcagatcaagaatggctgaagat
gatcataggtccaggtcaagagatgcagactatggaaagaggagacgaggcgactga
DBGET
integrated database retrieval system
