Camelina sativa (false flax): 104755615
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Entry
104755615 CDS
T05044
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104755615
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104755615
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104755615
03036 Chromosome and associated proteins [BR:
csat03036
]
104755615
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104755615
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104755615
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104755615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
HEAT_EZ
Adaptin_N
Cnd1
CLASP_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
104755615
NCBI-ProteinID:
XP_010476329
LinkDB
All DBs
Position
17:complement(6122943..6127101)
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AA seq
587 aa
AA seq
DB search
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSIIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLSTVEETCVREKAVESLCRIGSQMREN
DLVEHFFPLAKRLSAGEWFTARVSACGIFHIAYPSAPDPLKAELRSLYSQLCQDDMPMVR
RAAATNLGKFAATIESAHLKTDIMSMFEDLTQDDQDSVRLLAVEGCAALGNLLDPQDCVT
HILPVIVSFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVHSIREAAANNLKRLAEEFGPEWAMQHIVPQV
LEMINNPHYLYRMTILRAVSLLAPVMGSEITCSKLLPAVITASKDRVPNIKFNVAKMMQS
LIPIVDQSVVENMIRPCLVELSEDPDVDVRFFANQALQSIDNVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggttgatgagcctctgtatccgattgccgtgcttatagacgagcttaagaac
gatgatattcagcttagattgaactctattagacggctttctatcattgctcgtgctctt
ggagaggagaggactagaaaagagctgataccatttcttagtgagaacaatgacgatgac
gatgaggtgcttctggccatggccgaagagttgggtgtttttattccttatgttggaggc
gttgagcatgctcatgttttgcttccacctctggagacactctcgactgttgaggaaact
tgtgtcagggagaaagctgtggagtcactttgcagaattggttctcagatgagggagaat
gacttggttgagcatttctttcctctcgctaagcgactttcagctggtgagtggttcaca
gctagggtatcagcatgtgggattttccatattgcatacccaagtgctccagatccgctc
aaggcggagctaagatcattatacagtcagctgtgtcaagatgacatgccaatggtgcgc
agagctgcagcaacgaatttggggaagtttgctgctacaattgaatcagctcatttgaag
actgacattatgtccatgtttgaggatcttacgcaagatgatcaagattctgttagatta
ttggctgttgagggctgtgctgctcttgggaatttgttggatccccaggactgtgtcaca
cacattcttcctgtaattgtcagtttctcgcaggataagtcatggcgtgtgcgttatatg
gttgcaaatcagctctatgaactttgtgaagctgttggaccagagcctactaggacggat
ctggtgcctgcatatgttcgtctacttcgtgataatgaggctgaagttaggatagcagct
gctggaaaagtgaccaaattttgtcgcatattaaaccctgaactcgcgatccagcacatc
cttccctgtgtaaaggaattatcatcagactcttctcagcacgtcagatctgcattggcc
tcagttataatggggatggctccagtcttgggtaaggatgcaacaattgagcatcttctt
ccaatctttctttccctattgaaggacgaatttcctgatgtacgcttaaacattatcagc
aaacttgaccaagtgaaccaggttattgggattgatctactatcacaatctttattgcca
gccattgtagaacttgctgaagacaggcactggagggtacgtctggctataattgagtat
attccattgttggccagccaattaggtgtaggcttctttgacgataagcttggtgctctt
tgcatgcaatggttacaagacaaggttcactcaatccgcgaagctgctgcgaacaatctt
aagcgtcttgctgaagagtttggtcctgagtgggcaatgcagcatatagttcctcaggtt
ctagagatgatcaacaatccacactatctataccggatgacgattcttcgcgcagtatcg
cttctcgctccagtaatgggatctgaaatcacatgttccaaactcttgcctgcggttata
accgcatcgaaagacagagttccaaacatcaaatttaacgtcgccaaaatgatgcaatct
ctcattccgatagttgaccaatcggtcgtggagaacatgatacggccatgcttggtggag
ctaagtgaagacccggacgttgatgtacggttcttcgcaaatcaagctctccagtctatt
gacaatgtgatgatgtctagctaa
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