Camelina sativa (false flax): 104755738
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Entry
104755738 CDS
T05044
Name
(RefSeq) probable pectate lyase 3
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104755738
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104755738
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104755738
NCBI-ProteinID:
XP_010476496
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Position
17:complement(6629382..6631302)
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AA seq
455 aa
AA seq
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MAAAFLTLGGFFLSLLAIVAPQVGAHVAVFDSYWMQRKTDALKQTFGSYDPNPLNVTNHF
NYHVNLAVDATESINDTRRELTQVRSRRKLQKHGGKCVAYNPIDKCWRCDRNWANNRKKL
AECALGFGRKTTGGKDGPIYVVTDASDNDLINPKPGTLRYAVTRDGPLWIIFARSMIIKL
QQELMITSDKTIDGRGARVYIMEGAGLTLQFVNNVIIHNIYVKQIVTGNGGLIRDSEQHI
GLRTKSDGDGISLFGATNIWIDHVSMTRCEDGMIDAIDGSTAVTISNSHFTDHQEVMLFG
ARDEHVIDKKMQITVAFNHFGKRLEQRMPRCRFGTIHVVNNDYTHWEMYAIGGNMDPTII
SQGNRFIAPPNEQAKQITKREYTPFVEWKSWNWQSEGDYFLNGAYFVQSGKANAWSAKLH
NPIPSKFAIRPKPGTMVRKLTMEAGVLGCKHGKEC
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcgtttttgactcttggcggtttctttttatcgttattagctatagtggct
ccacaggttggagcccatgtggctgtctttgatagctactggatgcaacgtaaaaccgat
gcattaaaacaaacatttggctcttacgatcctaatccacttaacgtcaccaaccacttt
aattaccatgtcaatttagctgtggatgccacggaatcaataaacgatacaaggagagag
cttacacaggtaagaagtcgtcgaaaattgcaaaaacacggcggaaaatgcgtagcttat
aaccccatagacaaatgctggcgatgcgaccgtaactgggcaaataaccggaagaaacta
gcggagtgtgctctcggattcggccggaaaaccacaggaggaaaagacggaccgatctac
gttgtcaccgacgcgtctgacaacgatcttattaaccctaaaccaggaacgttaaggtat
gcagtaactagagacggacccctttggatcatatttgcaagaagcatgatcataaaactg
caacaagaattgatgataacgagcgacaaaacaatcgatggaagaggagcgagggtttac
atcatggaaggtgctggacttacgctgcaatttgtgaataatgtgatcatacacaatatt
tacgtcaagcaaatcgttactggtaacggtgggttgatcagagactcagagcagcacata
gggctaaggacaaaaagtgatggtgatggaatcagcttgtttggagcaacgaatatttgg
atcgatcatgtctcaatgacaagatgtgaagatggtatgatcgatgcaattgacggctcc
accgccgtaactatctccaatagtcatttcaccgaccaccaagaggtgatgctgtttggg
gcgagggacgaacacgtgatagacaagaaaatgcagataacggttgcgtttaaccacttt
ggtaagagactggaacagagaatgcctcgttgcagattcggaacgatccatgtggtgaac
aatgactacacacattgggaaatgtatgcaattggtggaaacatggaccctacaatcatt
agtcaaggaaaccgtttcattgctcctcctaacgaacaagccaaacagataacaaagaga
gagtacacgccattcgttgaatggaaatcatggaactggcaatcagaaggagattacttc
ctcaacggagcttactttgtgcaatcaggaaaagcaaatgcgtggagcgctaaactgcat
aacccgattccaagcaagtttgcaattcgacctaaaccgggaacgatggtccggaaactt
accatggaagcaggagtgcttggctgcaaacacggtaaagaatgctga
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