Camelina sativa (false flax): 104755829
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Entry
104755829 CDS
T05044
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104755829
03015 mRNA surveillance pathway
104755829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104755829
03041 Spliceosome [BR:
csat03041
]
104755829
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104755829
Spliceosome [BR:
csat03041
]
Complex C
Other components
EJC/TREX
104755829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
DUF4715
Motif
Other DBs
NCBI-GeneID:
104755829
NCBI-ProteinID:
XP_010476600
LinkDB
All DBs
Position
17:complement(7017571..7020440)
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AA seq
424 aa
AA seq
DB search
MGGTALEKTAEELRHEIDELHRQQREITERLRDPRGLRRGGFSGVVPRNQGRRGFTRHAD
RNDVEDERPAKRRLSSAVVKVDGEDVSKDEELLVDGNGTEVVAGENGTSDKSDKKLPGQR
RGDWSRRDAEQRGTKKGFEAFALPEPAPRVLPKNEDPKLVNRNRRILGNLQGTLEKFKKE
DKQRSGTDAYARRSAALQKAEQKSREESERLRLQERENMTEKRRRDLTLRARVAAKAEQK
KLELLFLQWSEHQKKLSKFIRTKAEPQIYYALAKPLEEDTAEVEQQKEQTFLEWKAARRQ
EVSEYQREIEEQCLANVEKELERWQNARNARKANNNGAMNLQETMDKELETHRMEHGPKK
RKIPGGGVGDEEEEDEVEDINGGEDEMIMDDILDEGGDGNIKEEGATDTVKAEAVEEDIK
PEVV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcaccgccttagagaagacagcggaagagctacgacacgagatcgatgagctt
caccgtcagcagcgcgagataacggagaggcttcgtgaccctcgtggactccgccgtgga
ggcttttcaggcgtcgttcctcgcaatcaaggccgtagaggcttcactcgtcatgcggat
aggaatgacgtagaagatgagcgtcctgcgaaacggagattgtcttccgccgttgttaag
gtcgacggtgaagatgttagtaaggatgaagagttactagttgatggcaatggaaccgag
gttgtagctggtgaaaatggaacctctgataaaagtgacaagaagctacctggacagcgt
cgtggagattggtctcggagggatgcagaacaacgagggaccaagaagggttttgaggct
tttgcactgccggaacctgcaccaagggttttacctaagaatgaggatcctaaattggtt
aataggaacagaagaatactggggaatcttcaagggactttggagaagttcaaaaaagaa
gataagcagcgttctggaacagatgcatatgcccgacggtccgctgccctacaaaaggct
gagcaaaagtcccgcgaagaaagtgaacggctgaggctgcaagagcgtgaaaatatgact
gaaaagaggagaagagatcttactcttcgagcccgtgttgctgctaaagcagaacaaaag
aagttggaactgcttttccttcagtggagtgagcaccaaaaaaaacttagcaaatttata
aggacaaaagcagagccacagatatactatgcgctagcgaagcctttggaagaagataca
gctgaggtggagcaacagaaagagcagacattcttagaatggaaggcggcaaggagacaa
gaagtgagtgagtatcaaagggaaatagaagagcaatgtctggctaatgtagagaaagag
ctggagaggtggcaaaacgcaaggaatgcgaggaaagcaaacaacaacggggcaatgaat
ttgcaggaaacaatggataaggaattagagacacataggatggagcacgggccaaagaag
agaaagatacctgggggaggagtaggagatgaagaggaagaagatgaagtagaggatatc
aatggtggggaggatgaaatgataatggatgatatacttgacgaggggggagatggaaac
atcaaggaggaaggggctactgatacagtaaaagcagaagcagtggaggaagatattaaa
cctgaggtcgtctag
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