KEGG   Camelina sativa (false flax): 104755829
Entry
104755829         CDS       T05044                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
csat03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104755829
   03015 mRNA surveillance pathway
    104755829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104755829
   03041 Spliceosome [BR:csat03041]
    104755829
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104755829
Spliceosome [BR:csat03041]
 Complex C
  Other components
   EJC/TREX
    104755829
SSDB
Motif
Pfam: Pinin_SDK_memA DUF4715
Other DBs
NCBI-GeneID: 104755829
NCBI-ProteinID: XP_010476600
LinkDB
Position
17:complement(7017571..7020440)
AA seq 424 aa
MGGTALEKTAEELRHEIDELHRQQREITERLRDPRGLRRGGFSGVVPRNQGRRGFTRHAD
RNDVEDERPAKRRLSSAVVKVDGEDVSKDEELLVDGNGTEVVAGENGTSDKSDKKLPGQR
RGDWSRRDAEQRGTKKGFEAFALPEPAPRVLPKNEDPKLVNRNRRILGNLQGTLEKFKKE
DKQRSGTDAYARRSAALQKAEQKSREESERLRLQERENMTEKRRRDLTLRARVAAKAEQK
KLELLFLQWSEHQKKLSKFIRTKAEPQIYYALAKPLEEDTAEVEQQKEQTFLEWKAARRQ
EVSEYQREIEEQCLANVEKELERWQNARNARKANNNGAMNLQETMDKELETHRMEHGPKK
RKIPGGGVGDEEEEDEVEDINGGEDEMIMDDILDEGGDGNIKEEGATDTVKAEAVEEDIK
PEVV
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgggaggcaccgccttagagaagacagcggaagagctacgacacgagatcgatgagctt
caccgtcagcagcgcgagataacggagaggcttcgtgaccctcgtggactccgccgtgga
ggcttttcaggcgtcgttcctcgcaatcaaggccgtagaggcttcactcgtcatgcggat
aggaatgacgtagaagatgagcgtcctgcgaaacggagattgtcttccgccgttgttaag
gtcgacggtgaagatgttagtaaggatgaagagttactagttgatggcaatggaaccgag
gttgtagctggtgaaaatggaacctctgataaaagtgacaagaagctacctggacagcgt
cgtggagattggtctcggagggatgcagaacaacgagggaccaagaagggttttgaggct
tttgcactgccggaacctgcaccaagggttttacctaagaatgaggatcctaaattggtt
aataggaacagaagaatactggggaatcttcaagggactttggagaagttcaaaaaagaa
gataagcagcgttctggaacagatgcatatgcccgacggtccgctgccctacaaaaggct
gagcaaaagtcccgcgaagaaagtgaacggctgaggctgcaagagcgtgaaaatatgact
gaaaagaggagaagagatcttactcttcgagcccgtgttgctgctaaagcagaacaaaag
aagttggaactgcttttccttcagtggagtgagcaccaaaaaaaacttagcaaatttata
aggacaaaagcagagccacagatatactatgcgctagcgaagcctttggaagaagataca
gctgaggtggagcaacagaaagagcagacattcttagaatggaaggcggcaaggagacaa
gaagtgagtgagtatcaaagggaaatagaagagcaatgtctggctaatgtagagaaagag
ctggagaggtggcaaaacgcaaggaatgcgaggaaagcaaacaacaacggggcaatgaat
ttgcaggaaacaatggataaggaattagagacacataggatggagcacgggccaaagaag
agaaagatacctgggggaggagtaggagatgaagaggaagaagatgaagtagaggatatc
aatggtggggaggatgaaatgataatggatgatatacttgacgaggggggagatggaaac
atcaaggaggaaggggctactgatacagtaaaagcagaagcagtggaggaagatattaaa
cctgaggtcgtctag

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