Camelina sativa (false flax): 104755937
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Entry
104755937 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin receptor RAD23a
KO
K10839
UV excision repair protein RAD23
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104755937
09124 Replication and repair
03420 Nucleotide excision repair
104755937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
csat03051
]
104755937
03400 DNA repair and recombination proteins [BR:
csat03400
]
104755937
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104755937
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104755937
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GFIT
Motif
Pfam:
UBA
XPC-binding
UBA_7
ubiquitin
CUE
Rad60-SLD
UBA_3
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
104755937
NCBI-ProteinID:
XP_010476726
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Position
17:7462086..7464979
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AA seq
365 aa
AA seq
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MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDHXKKV
TEEGFLVVMLSKSKTASSAGPSSVQPTSTATSTVSSTTTPAAPLTTQSIAVPAPNSTSAQ
EQPASQSDTYGQAASTLVSGSSVEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDY
LYSGIPETVVVPATNPSGVGSDAENAAPPASGGPNSSPLDLFPQEAVSDAVGGDLGTLEF
LRGNDQFQQLRTMVNSNPQILQPMLQELGKQNPQLLRLIQENQTEFLQLLNEPYEGSDGD
MDIFDQPEQEMPHAVNVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLEHS
ADFED
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgttaagactctcaagggtagtcatttcgaaatcagggttcttcccacc
gacacgataatggcggtgaagaagaatattgaagattcacaaagcaaagacaactatcct
tgtggacagcaattgctaattcacaatggtaaagttttgaaagatcacncgaagaaggtc
accgaagaaggttttcttgttgtcatgctcagcaagagtaaaactgcaagttctgctggt
ccctcttctgttcagcctacgtccactgctacatctaccgtatcttcaacaacaacgcct
gcagctccattgacaactcagtcaatagctgtgccagctccaaattctacttccgctcaa
gaacaacctgcgtctcaaagtgacacttatggtcaagctgcttcaactttagttagtggc
agtagtgttgagcaaatggttcaacaaataatggaaatgggaggtgggagctgggacaaa
gaaacagttactcgtgctcttcgtgcagcgtataacaaccctgagagagcagtggattat
ctatattctggaattcctgaaacagtagtcgttccagcaactaatccttctggagtagga
tctgatgcagaaaatgctgctcctcctgcttctggaggacctaattcatctcctctggat
ttgtttccccaggaagcagtttctgatgctgtaggtggagatcttggaacgcttgaattc
ctcagaggcaatgatcagttccaacaattacgaaccatggtcaattccaacccccagatt
ctgcagcctatgcttcaagagctcggaaagcagaatccccaacttctgaggctaattcaa
gagaaccaaaccgaatttcttcagttactaaatgagccctacgaaggatctgacggggat
atggatattttcgatcaaccagagcaagaaatgccccacgctgtcaacgttacccctgca
gagcaagaagcgattcaacggctcgaggcaatggggtttgatagagcattagtcatagaa
gccttccttgcgtgtgaccgtaacgaggaattggctgcaaactatctgctagagcactca
gcagattttgaagactga
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