Camelina sativa (false flax): 104756033
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Entry
104756033 CDS
T05044
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104756033
Spliceosome [BR:
csat03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104756033
Other components
Complex C specific factors
104756033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
104756033
NCBI-ProteinID:
XP_010476842
LinkDB
All DBs
Position
17:7839369..7842177
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AA seq
860 aa
AA seq
DB search
MDEYQEMERFSMDNDYEGGRWEGDEFVYEKRKEKRKQTKHDSTYGIFAESDSDSDYSSGG
GSRRKRRKDRDSGMKADSTKPVNFVSTGTVSPTREIDKDSREQHNGDKNSDKIEDGDMID
EDVPVRGGLGIGSSGLGSGLGLGLGLGFNSNGFDDEDNLLPGALGKKIADRAKMRGKAKM
EKRGQEGGGAKEGKKKTLAGDIGQFEKSTKGIGMKLLEKMGYKGKGLGKNQQGIVAPIEV
QLRPKNMGMGYNDFKEAKLPDLKKVEEKKIVGVSVSENEQRHGDSGGRNLWKKKKKVRKE
VYVTAEELLEKKQEEGFGGGQTIIDMRGPQVRVVTNLENLDAEEKAKDADVPMPELQHNL
RLIVDLVEHEIQKIDRDLRNERESALSLQQEKEMLITEEEKQKRHLDNMEYIADEISRIE
LENTSGNLTLDSLANRFEDLQASYPDDYKLCNLSTIACSLALPLFIRMFQGWDPLRDAVH
GLKAISSWRKLLEVQEDQNIWVVSTPYSQLVSEVVLPAVRIAGINSWEPRDPEPMLTFLE
TWENLLPSSVLHTILDTVVLPKLSTAVEYWDPQRERVAIHVWVHPWLPILGQKLEFMYQI
IQMKLSNVLDAWYPNDQSVYTILSPWKTVFDATSWEQLMRRYIVPKLQLVLQELQVNPAA
QDLERFHWVMMWASAVPIHLMADLMERFFFPKWLDVLYHWLLSKPSFEEIHGWYSGWKSL
FPQELSANERIRIQLKRGLDMLMEIVEGVEVSQPRAKANVHRQSEPAKAEPQAKARQMDS
TEVLSLKEVLEVFAQEKELLFKPKPNRMHNGLQIYGFGNVSVIIDSVNQKLFAQKDGAWF
LVTPDDLLRMHNNTTVSGKR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtatcaagagatggagagattcagtatggataatgactatgaaggaggtcga
tgggaaggtgacgagtttgtgtacgaaaagaggaaagagaagcggaaacaaaccaaacac
gactctacttatggaatcttcgctgagagcgattctgattccgattattctagcggcgga
ggatctcggaggaagaggcgtaaggatcgagactcgggaatgaaggccgactcaaccaag
cctgtcaattttgtttctacaggtacggtatcgccgactcgagagattgataaggattct
agagaacaacataacggtgataaaaatagtgataaaatcgaagatggtgatatgattgat
gaggatgttccagttagaggtggattgggtattggaagctcaggtttagggtcagggtta
gggttagggttagggttagggtttaattcgaatggttttgatgatgaggacaatctctta
ccgggtgcactggggaagaagatagctgatagggcaaagatgagagggaaggcaaagatg
gagaagagaggtcaagagggtggcggtgcaaaggaagggaagaagaagactttggccggt
gatataggtcagtttgagaagtctactaaaggaataggtatgaagctgcttgaaaagatg
gggtataagggaaaagggcttgggaagaatcagcaaggtattgtcgctcctattgaagtg
cagttgaggccgaagaatatgggtatggggtacaatgatttcaaggaggctaagttgcct
gatttaaaaaaggttgaggagaagaagattgttggtgtcagtgtcagtgagaatgaacag
cgtcatggtgatagcggagggagaaatctttggaagaagaagaagaaggttaggaaggaa
gtttatgtcactgcagaggagttgttagagaagaagcaggaagagggatttggtggtggg
cagaccattatcgatatgcgaggaccacaggttcgggttgtgacgaatttggaaaattta
gatgcagaggagaaagcaaaagacgcagatgttccaatgccagagttacaacacaacttg
cgcttgattgtcgatctagttgagcatgaaattcagaagattgatagggacttgaggaac
gagagagaatcagccttgagcttacagcaggagaaggaaatgcttataacggaggaagaa
aaacaaaaaagacacttagacaacatggaatatatcgcagatgaaataagtcgaatcgag
ctggagaatacatctgggaatttgacacttgactcacttgctaatcgtttcgaggacctg
caagctagctaccctgatgattataagctttgtaacttgtccaccattgcttgctcactg
gccttgcctctctttatcagaatgtttcaaggttgggaccctcttagggatgcagtgcat
ggtctcaaggctatatcttcttggagaaagcttttggaagtccaggaagaccaaaatatc
tgggtagtctcaacgccttatagccaactagtctcggaggtagtgttacctgctgtgcga
atagcaggcattaattcctgggaacctagagaccctgagccgatgcttacatttctcgag
acatgggaaaatttgctgccttcatctgtcttgcatacgattttggacacagtagtgctg
ccaaaattgtcaactgctgttgaatattgggatccccaaagggaacgtgttgccatccat
gtttgggtgcatccttggttgccaatacttggtcagaagttggagtttatgtaccagata
attcagatgaaattgagtaatgttcttgatgcttggtatcctaatgatcagtctgtctac
actattctttcgccatggaagaccgtttttgatgctacaagctgggaacagcttatgcgt
cgttacatagttcccaaacttcagctggttttgcaagagttacaggtaaacccggcagcc
caggatttagaaaggttccattgggtaatgatgtgggcatctgcagtacccatacatcta
atggctgatttgatggagaggttcttcttcccaaaatggctggacgtgttgtaccattgg
ttactgtctaaaccgagtttcgaagagatccacggatggtattctggttggaaatcatta
ttcccgcaagagctttcagcaaacgagaggatccgaatccagttaaagcgtggtttagat
atgttgatggaaatagttgaaggagttgaagtgtctcagccaagggcaaaggcaaatgtg
catagacagtccgagccagctaaggctgaacctcaagctaaggctcggcagatggacagc
actgaggtgctgagtttgaaagaagtgttggaagtatttgcgcaagagaaggagttgctg
ttcaaaccgaaaccgaatagaatgcacaatggtcttcagatatatgggtttggaaacgtg
agtgtgataatagactcagtgaatcagaagctgttcgctcagaaagatggagcttggttt
cttgtaactcctgatgacttgttgaggatgcacaacaatacaactgtttctggaaaacga
tag
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