Camelina sativa (false flax): 104756074
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Entry
104756074 CDS
T05044
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104756074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104756074
03036 Chromosome and associated proteins [BR:
csat03036
]
104756074
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104756074
Coactivators
SAGA/TFTC/STAGA complex
104756074
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104756074
STAGA complex
104756074
TFTC complex
104756074
SAGA complex
104756074
SLIK complex
104756074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
104756074
NCBI-ProteinID:
XP_010476893
LinkDB
All DBs
Position
17:complement(8028979..8032812)
Genome browser
AA seq
706 aa
AA seq
DB search
MAESIPSSSSLPPKSLQSPNPMEPSPASSSAPPLPPTSSSQQQQQHITAPPPPAISNSVN
SAASPAMTVTTTDGVVIQNNSQPNNNNNISSPNPTSNPPPVVGAQIPSPSPLSHPPPSSS
LDQQTQQLNQTPQLHQHQNQQLPQQQQQQQMMQQQISSSPIPQLSQQQQQILQQQQHMSP
QQIPMSNYQIAQSLQRSPSLSRMSQIQQQQQQQQGQYGNVLRQQAGLYGTMNFGGSGSVQ
QSQQQNQQQMGGGNPNLSRASLVGQSGHLPMLNGASGAAQLNIQPQLLAAASPRQKSGLV
QGSQFHPGSSGQQLQGMQAMGMMGSLNLSSQMRGNPALYAQQRINPGQMRQQLSQQNALT
SPQVQNLQRSSSLAFMNPQLTGLAQNGQAGMMQNSLTQQQWLKQMSGITSSNSFRLQPNQ
RQALLLQQQQQQLPSSQLHQSGMSLNQQQLSQIIQQQQQQSQIGQPQMSQSQQQQQLQQM
QQQLQQQPQQQMQQQQQQMQINQQQPSPRMSNHAGQKSVSLTGSQPDATQSGTTTPGGSS
SQGTEATNQLLGKRKIQDLVSQVDVHAKLDPDVEDLLLEVADDFIDSVTSFACSLAKHRK
SSVLEPKDILLHLEKNLHLTIPGFSSEDKHQTKTVPTDLHKKRLAMVRALLESSKPETNA
SNSKETMRQVMVNPNGGNHLLRPSPSSEQLVSQTSGPHMLQHMTRY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatcaattccatcatcgtcgtctctgccaccgaaatcactacaatctcctaat
cctatggaaccttctcctgcatcatcctctgcaccacctcttccacctacatcatcatcg
caacagcaacaacaacacataacagctcctcctcctcctgcgatttccaattctgttaat
tcggctgcgtctccggcgatgactgttactacgaccgacggtgttgtcatccaaaacaat
tcgcaacccaacaacaacaacaacatctcctctcccaaccctacttcgaacccaccaccc
gttgttggagctcagatcccgtctccttctcctctctctcatcctcctccttcttcatct
ttagatcagcaaactcagcaactcaatcaaactccacagcttcaccaacaccaaaatcag
caattacctcaacaacaacaacaacaacagatgatgcagcagcaaatctcttcatctccg
attccacaattatcacaacaacagcagcagattcttcagcaacaacaacatatgagtcca
cagcaaatcccaatgtcgaattaccaaattgctcaatctcttcagcgatccccttctctt
tctcgcatgagccaaattcagcaacaacaacagcagcagcaaggtcaatacggcaacgtt
ttgaggcagcaagctgggttgtacggtaccatgaactttggtggctcaggttcagttcaa
cagagccagcagcagaatcagcagcagatgggtggtggtaaccctaatttgtccagagct
tctttggttggccaaagcggtcacttgcctatgcttaacggtgcatctggagctgctcag
ttgaacattcaacctcagttattggctgctgcttcgccgaggcagaaatctggcctggtt
caaggttcgcagtttcatccagggagttctggacaacagttgcaagggatgcaagctatg
ggaatgatgggatcacttaatttgagctcgcaaatgagaggtaaccctgctctctatgct
cagcaacgaatcaacccggggcagatgagacagcaattgtcacagcaaaacgctcttact
tcacctcaggtccagaacctccaaagatcatcttctctcgcattcatgaatcctcagtta
acgggtctggcccagaatggacaagctggtatgatgcaaaactccttgacgcagcagcaa
tggctgaagcaaatgtctggaataactagctccaattcattccgactccaaccgaatcaa
aggcaggctctactcttacagcagcagcagcaacaattaccctcttctcagttacaccaa
tctggtatgtccttgaatcagcagcagttatcgcagatcatacaacagcagcaacaacaa
tcacaaataggccagccgcagatgagccaatcccagcaacagcaacaactacaacagatg
cagcaacaactacagcagcaaccacaacagcagatgcagcaacaacaacagcaaatgcag
attaatcaacaacagccatctccaaggatgtcaaatcatgcaggacaaaaatctgtcagt
ttaacgggttcacaaccggatgccacacaatcgggtacaacaacaccaggtggtagctca
agccagggaacagaagcaacaaatcaactccttggtaaaagaaagatacaggatttggtt
tcgcaggtagatgttcatgccaagttggatcctgatgttgaagacctccttttggaggta
gcagatgacttcattgattcggtgacgtcttttgcatgtagcttggctaagcatcgtaaa
tcatccgtattggagcccaaggatatattactccacctagagaaaaacttgcacttgaca
attcctggattctcgagtgaggataaacaccaaacaaaaaccgtaccaactgatctccac
aagaagcgacttgcaatggtgcgtgctttactagaatcctcaaaaccagagacgaatgca
agcaactccaaggaaactatgagacaagtgatggtgaacccaaatggtggaaatcatctc
ttaagaccatcaccaagttcagagcaattggtttcgcaaacgtccggtcctcacatgtta
caacatatgacacgttactaa
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