KEGG   Camelina sativa (false flax): 104756256
Entry
104756256         CDS       T05044                                 
Name
(RefSeq) sm-like protein LSM1A
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104756256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104756256
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104756256
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     104756256
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 104756256
NCBI-ProteinID: XP_010477119
LinkDB
Position
17:8834367..8835660
AA seq 128 aa
MSWAAPDDIFFSTSLAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGNL
YCDIPLGLYIIRGENVVLIGELDVDKEELPAQMVQVPEAEIKRAQKAEKEEMLLKGTMRK
RMEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggctgctcctgatgatatcttcttctccacttctcttgctgcttacttagat
aagaaacttcttgtgttgcttcgtgatggtaggaaactgatgggtctacttcggtccttt
gatcaatttgcaaatgctgtgttagaagaagcttatgaaagagtcatcgtgggtaatctc
tactgtgatattcccttaggtctttacattatccgtggcgaaaatgttgtcttgattggt
gaactggatgttgataaagaagagcttcctgctcaaatggttcaggttccagaagcagaa
atcaaaagggctcagaaagcagagaaagaagaaatgcttctaaagggtacaatgcgaaaa
agaatggagttccttgatctcgattag

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