Camelina sativa (false flax): 104756256
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Entry
104756256 CDS
T05044
Name
(RefSeq) sm-like protein LSM1A
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104756256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104756256
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104756256
mRNA degradation factors
5'-3' decay
Lsm complex
104756256
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
104756256
NCBI-ProteinID:
XP_010477119
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Position
17:8834367..8835660
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AA seq
128 aa
AA seq
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MSWAAPDDIFFSTSLAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGNL
YCDIPLGLYIIRGENVVLIGELDVDKEELPAQMVQVPEAEIKRAQKAEKEEMLLKGTMRK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcctgatgatatcttcttctccacttctcttgctgcttacttagat
aagaaacttcttgtgttgcttcgtgatggtaggaaactgatgggtctacttcggtccttt
gatcaatttgcaaatgctgtgttagaagaagcttatgaaagagtcatcgtgggtaatctc
tactgtgatattcccttaggtctttacattatccgtggcgaaaatgttgtcttgattggt
gaactggatgttgataaagaagagcttcctgctcaaatggttcaggttccagaagcagaa
atcaaaagggctcagaaagcagagaaagaagaaatgcttctaaagggtacaatgcgaaaa
agaatggagttccttgatctcgattag
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