KEGG   Camelina sativa (false flax): 104756506
Entry
104756506         CDS       T05044                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
csat  Camelina sativa (false flax)
Pathway
csat03030  DNA replication
csat03410  Base excision repair
csat03420  Nucleotide excision repair
csat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104756506
   03410 Base excision repair
    104756506
   03420 Nucleotide excision repair
    104756506
   03430 Mismatch repair
    104756506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csat03032]
    104756506
   03036 Chromosome and associated proteins [BR:csat03036]
    104756506
   03400 DNA repair and recombination proteins [BR:csat03400]
    104756506
DNA replication proteins [BR:csat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104756506
  DNA Replication Termination Factors
   ELG1-RFC complex
    104756506
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104756506
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104756506
  Check point factors
   HRAD17(Rad24)-RFC complex
    104756506
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 Rad17 RuvB_N Mg_chelatase AAA_16 AAA_11 AAA_assoc_2 AAA_14 ResIII AAA_5 DEAD AAA_24 SLFN-g3_helicase nSTAND3 PhoH AAA_28 AAA_19 DNAX_ATPase_lid AAA_30 AAA_2 Parvo_NS1 AAA_7 DNA_pol3_gamma3 Gp44_lid RNA_helicase AAA_25 AAA_18 DUF815 NPHP3_N NB-ARC AAA_23 IstB_IS21 bpMoxR
Other DBs
NCBI-GeneID: 104756506
NCBI-ProteinID: XP_010477410
LinkDB
Position
17:10129293..10132448
AA seq 339 aa
MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETADCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQGGYPCPAFKIII
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMT
HRIMHICNEEGLNLDEEALSTLSSISQGDLRRAITYLQSGARLFGSTITSTDLLDVSGVV
PLEVVTKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIIVEADNDITDIQKAKI
CKCLAETDKRLVDGADEYLQLLDVASNTIRALSEMAQDF
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcgccagttcttcagagctcacagccatgggttgagaaataccggccgaagcaggtt
aaggacgtggctcaccaggaagaggtggttcgggtcctcaccaacactctcgagactgct
gattgcccgcacatgctcttttacggaccgccagggacaggaaaaaccactactgcactt
gccatcgcccaccagctatttggacctgagctatacaagtctagggtgttggagcttaat
gcgagtgatgacagaggcattaatgttgttcggacaaagatcaaggattttgctgctgtt
gctgttgggtctaatcatcgtcaaggcggttatccatgcccagcatttaagatcatcatc
ctagatgaggctgattcaatgacagaagatgctcagaacgccttgaggcgcactatggaa
acttactccaaagtcaccagattctttttcatatgtaattacattagcaggatcatagag
ccccttgcttccaggtgtgcaaagttcagatttaaaccactttctgaagaagtcatgact
caccgtataatgcatatttgtaatgaagaaggtctcaaccttgatgaagaggctctttca
actttgagctccatatcacaaggggatctccgtagggccatcacatatctgcagagtggg
gctcggttgtttggatcaacgataacttctacagatttactcgatgtgtctggggtagtt
cccctggaggtagtcactaaactttttactgcatgcaaaagtggggatttcgatattgca
aacaaggaagtggataacatagttgcagaaggatatcctgcatctcaaatcatcaatcag
ctattcgatatcattgtggaggctgacaatgacataacagacatccaaaaggctaagatc
tgcaaatgtttagctgaaactgataagcgacttgtagatggggcagatgagtacttgcag
cttctagatgtggcaagcaatacaattcgtgccctctcagaaatggctcaagacttctaa

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