Camelina sativa (false flax): 104756614
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Entry
104756614 CDS
T05044
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 3-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104756614
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104756614
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104756614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-rbx1
zf-C3HC4_3
zf_RING_Vps8
Prok-RING_4
zf-ANAPC11
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
104756614
NCBI-ProteinID:
XP_010477527
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All DBs
Position
17:complement(10851788..10853524)
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AA seq
428 aa
AA seq
DB search
MNLVALLLLILHLFIVSRVEAGQVILMDPNITRSFVDMEASFSPLVNTEETGVVYVAEPL
NACRNLRNKPEKSPNGTSAFVLIIRGGCTFEYKVRNAQRSGFKAAIVYDNMDRNFLLPMA
GDSDGIYIQAVFVMKEAGETLKKYAGLAETEVRLVPDSEDSVWSLYATIALILSLATFGV
VVACVFVYRCCTTHSNSISQFNGMSSRKVKAMPSVTFSTCAKEDTTTGSSCAICLEDYNV
GDKLRVLPCGHKFHAACVDSWLISWRTFCPVCKRDAKRSVYEPPASERTPFLSSSTATSS
VVCIEPPPLVSSVSFSPAHVRSSNIQQYVRLSSHHNQSSPINISRTTENFRRQASPLLSS
SQRSYICMKSFHSLGYSTMSSLNAIDRSPYRPFPSNAPPGLASSTNHLLCNYTAKTFSPF
ASTHSLPD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgttgctctgctactcctaatattacaccttttcattgtttcacgtgtagaa
gccggccaagtcattttgatggatcccaacatcactcgctcttttgtcgacatggaagct
agcttctctccattagtgaatacggaggaaaccggagtggtttacgtggctgagcctctc
aacgcttgccgaaacttgaggaataaaccggagaagagtcctaatggtacttctgctttt
gtgttgatcataagaggaggctgcacttttgagtacaaagtcagaaacgcgcagagaagc
gggtttaaggctgccattgtatatgacaatatggaccgcaacttcttattaccaatggcg
ggggactcggacggtatatatattcaagcggtttttgtgatgaaagaagccggagaaact
ctcaagaagtacgctggtttggcggaaacggaagtcaggttggttcctgattcagaggac
tcggtatggtcgttgtacgctaccatagcattgatcttgtcgctggctacgtttggtgtt
gtggttgcttgtgtcttcgtctatagatgttgcacaacacatagcaactctatatctcag
tttaatgggatgagcagtagaaaggtgaaagcaatgccaagtgttacattcagtacttgt
gcgaaagaagataccacgactggttcctcttgcgctatctgccttgaagactacaatgtt
ggggacaagctcagggtcttaccttgcggacacaagtttcatgccgcttgcgtagattcg
tggcttatatcatggagaacgttttgtccagtgtgtaaacgggatgcgaaaaggagcgta
tatgagccaccagcttcagagagaacaccgtttctcagctcttcaactgcaacatcatct
gtagtttgtatagaacctcctcctttggtgtcctcagtttctttctctccagcgcatgtg
cgctcgtccaacattcaacaatatgtcaggttgtcctctcaccacaaccagtcttcccca
ataaatatcagccgtaccaccgagaatttcaggcgacaagcctcaccattgctgtcatca
tcacagagatcatacatctgtatgaagtctttccattcacttggttattcgaccatgtca
tctctcaacgctatcgacaggtcaccttaccgtccattcccaagcaatgcacctcctgga
ttagctagttcgacaaatcatctgctttgcaattatacagcaaaaacattctctcctttc
gcctctacacactcgcttcctgactga
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