Camelina sativa (false flax): 104756677
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Entry
104756677 CDS
T05044
Name
(RefSeq) cell division control protein 48 homolog A isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
csat
Camelina sativa (false flax)
Pathway
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104756677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104756677
03009 Ribosome biogenesis [BR:
csat03009
]
104756677
04131 Membrane trafficking [BR:
csat04131
]
104756677
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104756677
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104756677
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104756677
Membrane trafficking [BR:
csat04131
]
SNARE
SNARE associated proteins
Others
104756677
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104756677
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104756677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_22
AAA_14
AAA_33
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
Vps4_C
ABC_tran
Viral_helicase1
AAA_7
NACHT
NB-ARC
TsaE
AAA_lid_PRS2_C
AAA_24
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
104756677
NCBI-ProteinID:
XP_010477638
UniProt:
A0ABM0WXN8
LinkDB
All DBs
Position
1:3763631..3768744
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AA seq
809 aa
AA seq
DB search
MSTPAESSDSKSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGDT
ILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHI
LPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVV
APDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWN
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSGGGGDGGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNI
FKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSEN
PEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFEN
STGSGATTGVADPFATSAAAAADDDDLYN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaccagctgaatcttcagactcgaaatcgaagaaagatttcagtactgctatt
ctcgagaggaagaagtctcctaaccgtcttgtcgtcgatgaggctatcaacgatgataac
tccgtcgtctctcttcaccctgctaccatggagaagcttcagctcttccgtggtgatacc
attctcatcaagggtaagaaaagaaaggacactgtgtgcattgctcttgctgatgaaaca
tgtgaggagccaaagatccggatgaacaaagttgtcagatctaacttgagggttagactc
ggagatgttatttctgttcaccaatgcccagatgtcaagtacggaaaacgtgttcacatc
ttgcctgttgatgataccgttgaaggggttactggaaacctctttgatgcatacttgaaa
ccttatttccttgaggcataccgcccagtgaggaagggtgatctcttcctagtcagagga
ggaatgaggagtgtggagttcaaagttatagagaccgatcctgctgaatactgtgtggtt
gctccagacacagagattttctgtgagggtgagcctgtgaagagagaggatgaagaaagg
ctagatgatgtaggttatgatgatgttggtggtgtcagaaaacagatggcccagatcagg
gaacttgttgaacttccattgaggcatccacaactattcaagtccattggtgttaagcca
ccaaagggaatccttctttatggacctcctgggtctggaaagactttgattgctcgggct
gtggctaatgaaactggtgccttcttcttctgtatcaatggacccgagatcatgtctaaa
ctggctggtgagagtgagagcaacctgaggaaagcatttgaggaggctgagaaaaatgcg
ccttcgatcatcttcattgatgagattgactctatagcaccaaaaagagagaagacaaat
ggagaggttgagagaaggattgtgtctcagctccttacgctcatggatggactcaaatcg
cgtgctcatgttattgtcatgggagcaaccaatcgtcccaacagtattgacccagctctt
agaagatttggaagatttgatagggagatcgatatcggggttcctgacgaaattggacgt
cttgaagtgctcaggattcatacaaagaacatgaagcttgctgaagatgtggatctcgaa
aggatctcaaaggacacacatggttacgttggtgctgatcttgcagctctgtgcacagag
gctgccttgcaatgcatcagggagaagatggatgtgattgatttggaagatgactccata
gatgctgaaatcctcaattccatggcagtgaccaacgagcacttccacactgctctcggg
aacagcaacccgtctgcacttcgtgaaaccgttgttgaggttcccaatgtctcatggaat
gatatcggaggtcttgagaatgttaagagagagctccaggagactgttcaatacccagtc
gagcacccagagaaatttgagaaattcgggatgtctccatcaaagggagtccttttctac
ggtcctcctggatgcgggaaaaccctattggccaaagctattgccaacgagtgccaagct
aacttcatcagtgtcaaaggtcctgagcttctgacgatgtggtttggagaaagtgaagca
aatgtccgggaaatctttgacaaggcccgtcaatccgctccatgtgttctcttctttgat
gaactcgactccattgcgactcagagaggaagcggaggcggtggcgatggaggcggcgct
gcggatagagtcttgaaccagcttttgactgagatggacggaatgaatgccaagaaaacc
gttttcatcatcggagcaaccaatagaccagacattattgattcagctcttcttcgtcct
ggaaggctcgaccagctcatttacattccactaccagacgaggattcccgtctcaatatc
ttcaaggccgccttgaggaaatctcctattgctaaagatgtagacatcggtgcacttgct
aaatacacacagggattcagtggtgctgatatcactgagatttgccagagagcttgcaag
tacgccatcagagagaacattgagaaggatattgaaaaggagaagaggaggagcgagaac
ccagaggctatggaggaagatggtgtggatgaagtatcagagatcaaagctgcacacttt
gaggagtctatgaagtatgctcgtaggagtgtaagtgatgcagacatcaggaagtaccaa
gcctttgctcagactttgcagcagtctagagggttcggttctgaattcaggttcgagaat
tctactggttcaggtgctaccactggagtcgcggatccgtttgccacgtctgcggccgct
gctgcggatgatgatgatctctacaactag
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