Camelina sativa (false flax): 104756689
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Entry
104756689 CDS
T05044
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104756689
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
104756689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
104756689
NCBI-ProteinID:
XP_010477614
LinkDB
All DBs
Position
17:11322766..11330877
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AA seq
1613 aa
AA seq
DB search
MEQPQRTTVAAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRPKPDESLRDPPNKSQKRV
HAPNRDLPPRNEQFILDFEQLQTQFNDPEQLRTITESVLISLVVQCSNHAPRAEFLLFAL
RTLCRISYINWDTFLPSLLSSVSAAEASITQSAQAAAGSSATSSQSLVPVSANPIIPNHS
ANPTSLLPSAHGIGSPSPSGNEPGMSFAQVRSLENGHQMIARAGQSVRDNAMRNSQRIRA
AAINSLRQLSCKIILVGVEFNLKPVTHAEIFQYMMNWLVNWDRRDLGTEDSAGKSWRSEK
TLAEWLRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRDAM
AMHMLMLDQHLHCPTFGTHRIVSHITANVSVEAMAHFRHSPITYPSVLGEPLYGEDLAMS
IPKGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPPPQAAPIPGAVFTSEMICEA
IIDRIVELLKLTNADANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGVDNHILR
TNHVTWLLAQIIRVELVMTALNSDAKKVETTRKILSFHREDRNSDPNNPQSVLLDFVSSC
QNLRIWSLSTTTRAYLNNEQLLKGKQIDEWWRSKGERMMDYMNMDDRSIGMFWVVSYTMA
QPACETVINWLSSAGMAELPGLQPNDRVMMTQEVTPLPMSLLSGFSMNLCLKLALQMEEA
LFVSQVVPSIAMVETYTRLLLISPHSMFRSHFSQLAQRNASLLSKPGVTLLVLEILNYRL
LPLYRYQGKSKTLMYDVTKIISALKGKRGDHRIFRLAENLCMNLILSLRDFFSVKREGKG
PTEFTETLNRITIMTLAITIKTRGIADADHLVYLQTMLEQILATSQHTWSEKTMRHFPSL
LHDTLVGRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVVTYLGHSFPQHRQYLCA
GACLLMQGHADNINSANLARVLREVSPEEVTANIYTLVDVLLHHIHVDLQQGQSLEAVLD
KAGANLAFFFWTHEMLPLDIFLLALIDRDDDPHALIIAMSLLKTPDLLLRIKNYCQNRGS
PEHWLITQVFKRNDLQKALGNHLSWKDRYPTFFDDIAARLLPVIPLVVYRLIENNAMEQA
DNLLLLHSHFLAYHPLRFTFVRDILAYFYGHLPGKLVLRMLKVLDLSKIPFSESFPQYIS
PAGAAVCPPLDYFATLLLNLVNNVIPPLSSSSNCSSRSGSMADILNSSARPPHGKTPGTS
QPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVSSLVQIIVNIQSTL
IQSGNGFQGAANGVGQGSVLPTSPSGGSTDSMSAGRSTCLIPGINTASFVSRSGYTCQQL
SCLLIQACGLLLAQLPPDFHTQLYSEASRVIRETWWLKDGTRSQGEIDSALGYALMDPTW
AAQDNTSTAIGNTVALLHAFFSNLPQEWLDGTNNIIINLRPVTSVAMLRVVFRIMGPLLP
RLANTHTLFNKTLALLLSALVDVFGKNAQTTAPVEASQIADLIDFLHHIIHYEGQGGAVQ
TNSKPRPDILVLIGRAADSLRPDVQHLLAHLKTDPNSSIYAAAHQNTAKTNTS
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacctcagcgaacaacagtcgctgctgcaacgccttcgtcatcacgatcttac
caattccacccagctcgtgctgctatcatcgatctcttcaatctctacttagggagagga
agccgtcctaagcccgatgagtccctccgagatcctccgaacaaatcacagaagcgtgtt
catgctcccaatagagacttacccccaagaaacgagcaatttattttggattttgagcag
cttcagacccaattcaatgatccagagcagttgaggacgattacggagtcagttttgata
tctttggttgtgcaatgtagcaaccatgcgcctcgtgctgagtttcttctctttgcattg
cgtacattgtgtaggattagttatatcaattgggatacctttttaccatcccttctctct
tcggtttctgctgctgaggcttccataacacaaagtgctcaagcagctgctggttcttct
gctacttcttcacagtctttagttcctgtttctgcgaatcctattatccctaatcattcc
gctaatccaacgtcattgttgccttcagctcatggtattggttctccatcaccttcaggg
aatgagccgggaatgtctttcgcacaggttagatctttggagaatgggcatcagatgatt
gcaagggcaggccagagtgtaagagataatgctatgagaaacagtcaacggataagagct
gctgcaatcaacagtctgcgccagctcagttgcaagattatcttggttggcgttgaattt
aatctcaaacctgttactcatgctgagattttccagtacatgatgaattggcttgtgaac
tgggacaggagagatctgggaactgaggactctgcaggaaagtcttggagatctgagaag
actttagctgaatggttacggagttgtttggatgtcatctggctgttggtagaagagggt
gaatctaggattccgttttatgagttgttgcgcagtggtctacagtttatagagaacata
cctgatgatgaagccttgttcactcttatcatggagatacaccggaggcgagatgcgatg
gccatgcacatgctcatgttggaccaacatcttcactgtccaacttttggtacccatcgt
atagtgtcccatataactgccaatgtttctgttgaagctatggcacactttcgacattca
ccaattacgtatccaagtgtgcttggtgaacctttgtatggagaggacctggcaatgtct
attccaaaaggaagcctggattgggagagagcagtgcgttgcattagacatgctattcgc
actacgccatcaccggactggtggaagcgtgttcttgttgtggccccttgttatagacca
cctccacaagcagcgcccatccctggtgctgttttcacttctgaaatgatttgcgaggca
atcattgacaggattgttgaacttcttaagctaaccaatgcagatgcaaattgctggcaa
gagtggctggttttctcggatattttcttctttctaatcaaaagtgggtgtactgatttt
gttgatttcattgacaagttggttttacgccttaacggtgttgataaccatattcttcgg
acgaatcatgtgacgtggctgcttgcacaaataatacgcgtggagcttgtgatgactgcg
ttgaattcagatgctaaaaaggtggagactactaggaagatcttatcatttcacagggaa
gacagaaattctgatcccaataatcctcagagtgtgttgcttgacttcgtaagcagttgt
cagaatctacggatttggtcactaagcacaacgactagggcatacctaaacaatgaacag
ctattgaagggaaaacagatcgatgagtggtggagaagcaaaggggagcgcatgatggat
tatatgaatatggatgataggtcgattggcatgttttgggttgtttcctacaccatggca
caaccagcatgtgaaacagttataaattggttatcttcagctggcatggctgagttgccg
ggattacagccaaacgacagagtaatgatgacgcaggaagtgacaccgttacctatgtca
ttgctatctggcttttcaatgaatttgtgcttgaaattggcccttcagatggaagaagct
ttgtttgttagccaggttgttcctagtattgcaatggttgagacatacacaagattgctg
ctgatttcccctcactcgatgttccgttcgcatttcagtcaattggcccagcgaaatgct
tctctgctaagcaagcctggggtcacgttgcttgttcttgagattctgaattatcgtttg
cttccgctctacagataccaaggaaagagtaaaactttaatgtatgatgttactaaaata
atatctgcattgaaaggaaaacgtggtgaccaccgtatattcagactagctgaaaactta
tgtatgaatctcattttatcactcagagactttttttctgtgaaacgggagggaaaaggg
ccaactgaattcactgaaacattaaaccgcataaccatcatgactcttgctatcacgatc
aaaacacgtggtatcgctgacgctgatcatttagtttatctgcaaaccatgttggaacaa
atactcgcgacgagtcagcatacatggtcagagaagacgatgcgacattttccatccctt
ctccatgacactttggttggacgggtagacaagaggggcctatcaattcaggcgtggcaa
caggctgaaacaactgtgataaaccagtgcactcagcttctctcaccatctgctgaaccc
gcgtatgttgtgacatacctcggtcacagttttcctcaacaccgccagtatctatgtgct
ggtgcttgtctgctgatgcaaggccacgctgataacatcaacagcgcaaatctggcacgg
gttctgagagaagtttctcctgaagaagtcactgctaacatatacactttggtcgatgtt
ttgcttcaccacattcatgtagatcttcagcaaggacaatctttagaggcagttctagac
aaggcaggcgcaaatcttgcatttttcttctggacacatgaaatgcttcctctcgacatt
tttcttctagcgctcattgaccgcgatgatgatccgcacgccttgataattgcaatgagc
ctacttaaaacgccagaccttctgctgaggattaaaaactactgccaaaaccgtgggtct
cctgagcactggcttatcacacaggtgttcaaacgaaatgacttgcagaaggcccttggt
aaccatctttcttggaaggacaggtatccgacgttctttgatgatattgcggcgcgtttg
cttccagtcatcccgctagtggtttacaggctcatcgagaacaatgcgatggagcaagct
gataatcttttgcttttacactcgcattttctagcttaccatcctctcagattcacgttt
gttcgtgacatactcgcctatttctatggtcatcttcctgggaaacttgttctgcgcatg
ctcaaagtacttgatctcagcaagattccattctctgaatcattcccgcagtacattagc
ccagccggtgccgctgtatgcccacctctagattacttcgccactcttctgcttaatctc
gtaaacaacgttatacctccacttagcagcagcagcaactgcagctcgaggtctggctca
atggcagacatcttaaacagctcagcgagacctcctcatggaaaaactccaggaacatct
cagcctggaccagcaaacgcctctgagggccagaaagcattctatcagatacaggatcca
ggaacttacactcaattggttcttgagacggccgtgatcgagatcctctcgcttcccgtc
tccgctgctcagattgtctcttcgcttgtccagataattgtcaacatacaatcgactctc
attcaatctggaaacgggttccagggcgctgcaaacggggtggggcaaggttcagtactg
cctacgtctccctcaggagggagcacggactccatgagcgctggccggtccacttgtctg
attcctggtatcaacacggcgagctttgtctctagaagcggttatacatgtcagcaactg
tcgtgtctgttgattcaagcttgtgggctcttgttggctcagctccctccggattttcac
acgcagctttactcggaggcatcacgtgtgataagggaaacatggtggcttaaggacggg
acgagatcacaaggtgaaatagactcggctcttggatacgctttgatggatcctacatgg
gctgctcaggacaacacctctactgccataggaaatacagtcgccttgcttcatgctttc
ttcagcaatctcccacaagaatggcttgatggcacgaataacatcatcataaatctccgg
cctgtgacatctgttgcaatgctcagagttgtattccgtattatggggccactgcttccg
aggctcgccaacacacatacgctctttaacaagacgctagcccttctcttaagcgcattg
gtcgatgtgtttggaaagaacgcacagacaacagcccctgttgaagcatcccagattgca
gatcttattgatttcttacaccatataattcactacgagggacaaggaggagctgttcaa
actaacagcaagccgagaccagacatcttggtgttaattggaagagcagcagattctctt
cgaccagatgtacaacaccttctcgctcacctcaaaaccgaccccaattcttcgatatac
gcagctgctcatcagaatactgcaaagaccaacacctcttga
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integrated database retrieval system
