Camelina sativa (false flax): 104756798
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Entry
104756798 CDS
T05044
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3
KO
K11644
paired amphipathic helix protein Sin3a
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104756798
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
104756798
REST complex
104756798
Heterochromatin formation proteins
Other heterochromatin formation proteins
104756798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
104756798
NCBI-ProteinID:
XP_010477744
UniProt:
A0ABM0WXX7
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All DBs
Position
17:complement(11940095..11947373)
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AA seq
1336 aa
AA seq
DB search
MVGGGSAQKLTTNDALAYLKAVKDKFQDQRDKYDEFLEVMKNFKSQRVDTAGVITRVKEL
FKGHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKARFQGDDRVYK
SFLDILNLYRKDSKSITEVYQEVAVLFRDHTDLLVEFTHFLPDTSATATIQSVKTSVRDR
GISLPDKKDRIITPHPDHDYSTEHVDLDRERPMKKENKEYVRGYNKENEHRDARDFQTDS
KKVQFLNNKQKVYIRGDDSAEISNHVREGKKISGAVPSSSTYDEKGAMKSYGQDIAIVDR
VKEKLNASEYQEFLRCLNLFSKEIISRPELQSLVGNLIGVYPDLMDSFIEFLVHCEKNEG
LLSGILTKKSLWSEGKYPQPPLDNDRDQEHKRDEGFRDKDHEKERLEKAAASQKWAKPIS
ELDLSNCEQCTPSYRLLPKSYPISIASQKTELGKQVLNDHWVSVTSGSEDYSFSHMRKNQ
YEESLFKCEDDRFELDMLLESVNSTTKHVEEVLAKINSNELKTNSPIRVEDHLTALNIRC
IERLYGDHGLDVMDVLRKNVSLALPVILTRLKQKQEEWVRCRSDFDKVWADIYAKNYYKS
LDHRSFYFKQQDSKNLSMKALLAEIKETTEKKREDDSLLALAAGNRLSISPNMEFDYPDS
DLHEDLYQLIKYSCAEMCSTEQLEKVMKIWTNFVEQIFGVPSRPQGAEDREDVVKSTNQN
VKSGCASAGESEGSPQKCNSIADSKRSKASRKINERNQLGQSSNPDRDSTAGRTSDGLCE
TAQYDKMEKNVATPDERPESKAVSIECVQDSTALCVDGLLDQSNGGNNIVHMAGHCNNNL
KPSGMTRGIELELKMNDGNGPKVEVGNKKVLTNGISVEITSNQELAGKSKVEREEGELSP
NGDFEEDNFAVYAKSGLEATSKANDNAGNSLSRERIREDEPSCLETGAENDAEGDENAAR
SSEDSRNAYENGDVSGTESGGGEDPEDDMDPNNKGESEGEAEGMADAQDAEEEGSALPFS
ARFLLHVKPLAKYVPSTLALHDKESLKNSQVFYGNDSFYVLFRLHRMLYERILSAKVNSS
SPDGKWKTSNTKNPTDSYARFMTALYNLLDGTSENAKFEDDCRAIIGTQSYVLFTLDKLI
HKFIKHLQGVAADEMDNKLLQLYAYEKSRKPETIFDAVYYDNARVLLPDENIYRIECKLA
TPAKLSIQLMCNGLDKPDVTSVSIDPTFAAYLHNDFLSIQWNARENHRIYLNRNKRKIGG
EDEQLYSTDGVKIKNGLECKIACSSSKVSYVLETEDLLVRVKKRRKTLNQNQDSISNCCL
IRQKRLQRYQRLVTSL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggttggaggaggaagtgcacagaagcttactactaatgatgcgcttgcataccttaaa
gctgtcaaggataaatttcaggatcaacgtgacaaatatgacgagtttctcgaagtcatg
aagaactttaaatctcaaagagttgatacagctggtgtcataacaagggttaaagaactt
tttaaagggcaccaagaattgattttgggtttcaatacctttttaccaaagggttttgag
atcacacttcaacccgaggatggacaacctccactgaagaaacgcgttgagtttgaggaa
gcaattagtttcgtgaacaagattaaggcaaggtttcagggcgatgatcgtgtatacaaa
tcatttttagacattttaaacttgtacagaaaggatagcaagtctatcactgaggtctac
caggaggttgcggtcctatttcgagatcatacagatttactagtggagtttactcatttt
ctacctgatacttcagcaacagccactattcaatctgttaaaacttcagttcgtgacaga
gggatttctcttcctgataagaaggaccggatcattactccacatcctgaccatgactat
agtactgaacatgttgacctggaccgagagagacctatgaagaaagaaaataaagaatac
gtgagaggttataacaaagaaaatgagcatagagatgccagagatttccaaactgatagc
aaaaaagtgcagtttctcaacaacaagcaaaaagtgtatattagaggtgatgattctgct
gaaatttcaaatcatgtcagggaaggaaagaaaatttctggagcggttcctagttcatct
acttatgatgaaaaaggtgccatgaaaagttatggtcaagacatagctattgtcgataga
gtaaaggaaaagcttaatgcctcagagtaccaggagttcttacgttgtcttaatctcttc
tcaaaagaaataatcagccgaccagaattgcaatctttggtaggaaatttaattggagta
tatcctgacctcatggattcctttatagagtttttggtgcattgtgaaaagaatgaagga
ctgctttctggtattctaactaagaaatccttgtggagtgaaggcaaatatcctcaaccg
ccactggacaatgatagagaccaagaacataagagagatgaagggtttagggacaaagat
catgagaaggagaggcttgaaaaagcagcagcaagtcagaaatgggcaaagccgatcagt
gaactagatctctcgaattgtgaacaatgcactcctagttatcgattacttccaaaaagt
tacccaatttccattgcaagccagaagacggagcttggtaaacaggttcttaatgatcac
tgggtctccgtcacatcaggaagtgaagattattcatttagccacatgcgcaagaaccag
tatgaagagagcctcttcaaatgtgaggatgacaggttcgaacttgacatgctattagaa
tcggtgaattcaactacgaagcatgtggaagaagtattggcaaagattaacagtaacgaa
ctgaaaaccaacagcccaatccgtgtcgaggatcatctcacagctctaaacataagatgt
atagaacggttatatggtgatcacgggttagatgtgatggatgtgttaaggaagaacgtg
tctctagctttacctgttatcctaacacgtttgaaacagaagcaagaagaatgggtaagg
tgtcgctctgattttgataaagtctgggctgacatatatgcgaagaactattacaagtcg
cttgatcatcgaagtttctacttcaaacagcaggattcaaagaatctgagcatgaaagca
ttgttggcagagataaaagagactactgaaaagaagcgagaagatgattcacttcttgca
cttgcagccggaaatagactatccatttccccaaatatggagtttgattatccagattct
gatcttcatgaagatctttaccagctgatcaagtattcatgtgcagaaatgtgctctacc
gaacagttagaaaaggtaatgaagatttggacaaatttcgtggaacaaatatttggtgtt
ccttctcgccctcaaggtgctgaagaccgagaagacgttgtcaagtccacaaaccagaat
gtaaaaagtggttgtgcaagtgctggagagagtgagggaagtcctcagaagtgcaatagt
attgctgactctaaacgctcgaaggcatctcgaaaaattaatgaacgtaatcagttgggg
caaagcagtaatccagatagggacagcacagctggtaggacctcagatggcttatgtgag
actgctcagtatgataaaatggagaagaatgtagctacacctgatgaaaggcctgaaagc
aaagccgtttctattgaatgtgtacaagattcaactgctctctgtgtagatggattatta
gaccaaagtaatggaggaaacaatatagtacacatggctgggcattgcaataacaatctg
aagcctagtggtatgacccgtggaatagagttggagttgaagatgaatgatggaaatggg
ccaaaagtagaggtcggtaacaagaaagtattgacaaatgggatctcagtagaaataaca
agtaatcaagagttagcggggaaatccaaagttgaaagagaagaaggtgaactatctcct
aatggagactttgaggaagataattttgcagtttatgcaaaaagtggtttggaggccact
agcaaagcgaatgataacgctggtaatagcttaagccgagagagaattagagaagatgaa
ccaagttgtctggagacaggggctgagaatgatgctgaaggtgacgaaaacgctgcaaga
tcatcagaggacagcagaaatgcatatgagaacggtgatgtttctggaacggagtctggt
ggtggtgaagatccggaggatgatatggatcccaataacaagggagaaagtgaaggcgag
gctgaaggtatggctgatgcacaagatgctgaagaagaaggatctgccttacccttttca
gcacgattccttctgcatgtaaagcccttagcaaagtatgttccttcaacgttagctttg
cacgacaaagagtctctgaagaactcccaagtcttctatgggaatgattcgttttacgtg
cttttcaggcttcacaggatgttgtatgagagaatactatcagcaaaagtgaactcatca
tccccggacggaaagtggaagacctcaaataccaaaaatcctaccgattcctatgccaga
ttcatgactgctctctacaatttacttgatggtacatctgaaaatgcaaagtttgaagat
gactgccgagccataatagggactcagtcttacgttctctttacactggacaaactgatc
cataaattcatcaagcatctccaaggagtagcagctgatgagatggacaacaaacttctt
cagctttatgcatatgagaaatctagaaagcctgaaacgatttttgatgctgtttattac
gacaacgcccgtgtcctcctccccgatgagaacatttaccgtattgaatgtaaattagca
accccagccaaactctctattcagcttatgtgcaacggtcttgataagcccgatgtgaca
tctgtatccattgacccgacctttgcagcttatctccacaatgacttcctctccatacaa
tggaatgcaagagaaaatcacagaatctatttaaataggaacaagcgcaaaattggtggt
gaagatgaacagctatacagcacagatggagttaagattaaaaatgggttggagtgtaag
atagcttgcagttcttcaaaggtctcatatgtattggaaacagaagatttattggttcga
gttaaaaagagaagaaaaactttgaaccagaatcaggattccatttccaattgttgtttg
attaggcaaaagaggttacaaagataccaaagacttgtgaccagcctgtaa
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