Camelina sativa (false flax): 104756919
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Entry
104756919 CDS
T05044
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104756919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104756919
03110 Chaperones and folding catalysts [BR:
csat03110
]
104756919
03029 Mitochondrial biogenesis [BR:
csat03029
]
104756919
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104756919
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104756919
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104756919
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104756919
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104756919
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104756919
Exosomal proteins of other body fluids (saliva and urine)
104756919
Exosomal proteins of breast cancer cells
104756919
Exosomal proteins of colorectal cancer cells
104756919
Exosomal proteins of bladder cancer cells
104756919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
104756919
NCBI-ProteinID:
XP_010477879
LinkDB
All DBs
Position
17:12720741..12726147
Genome browser
AA seq
607 aa
AA seq
DB search
MASSQAALSALPLADRNFRKKPSSSSNFVFRARAAAKQVHFNRDGSVTKKLQAGADMVAK
LLGVTLGPKGRNVVLPNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDLA
GDGSTTSIILAHGLITEGIKVVSAGINPIQVARGIEKTAKALVLELKSMSREIEDHELAD
VAAVSAGNDYEVGNMISNAFQQVGRAAVVTIEKGRYLVNNLEIVEGMQFNRGYLSQYFVT
DRRKREAEFHDCKLLLVDKKITNPKDMFKILDAAVKEEFPVLIVAEDIEQDALAPVIRNK
LKGNLKVAAIKAPAFGERKSHCLDDLAIFTGATVIRDEMGLSLEKAGKEVLGTAKRVLVT
KDSTLIVTNGDTQKAVDERVSQIKNLIQNTEESFQKKILNERVARLSGGIAIIQVGAQTQ
VELKDKQLKVEDALNATKSAIEEGIVVGGGCALLRLASKVDKIKDTLDNSEQKIGAEIFK
KALSYPIRLIAKNAGTNGNIVIEKVLSNKNTMYGYNAAKNQYEDLMLAGIIDPTKVVRCC
LEHAASVAQTFLTSDCVVVEIKEIKPRPIINPPLPTSPPATSSMFPDRKLPRFPQITPRT
RSHFPRK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcccaagctgcactctctgcgttgcctcttgctgatcgaaatttccgtaaa
aagccttcttcgtcttcaaatttcgtctttagagcaagagctgctgcaaaacaagttcac
tttaaccgtgatggctctgtcaccaagaagcttcaggcaggtgcagatatggtggctaag
ctattgggcgtgacattgggtcctaagggacgaaacgtggtgttgccgaacaagtacgga
cctcccaagatcgtcaatgacggtgaaacagttctcaaagagattgaattagaggaccct
ttagagaatgttggagtgaaacttgtgagacaagcgggtgctaagactaatgaccttgct
ggtgatggttccactacatctataattcttgctcatggccttattactgaaggtattaag
gtggtttctgctggaataaatcctattcaagttgcccgcggtattgagaaaaccgcaaaa
gctcttgttttagagctcaagtcaatgtccagagagattgaagatcatgagcttgctgat
gttgcagcagttagtgcggggaatgactacgaagtgggaaacatgatttccaatgctttt
caacaagtagggagggctgctgtagtaacaatagagaaaggaagataccttgtgaacaat
cttgagattgtggaaggaatgcagtttaatcgtggttatttatcgcaatactttgtcact
gatcgaaggaagagggaagctgaattccatgactgcaagctgcttttggttgacaagaaa
ataacaaatccaaaagatatgttcaagatattggatgctgctgttaaagaggagtttcca
gttcttatagttgccgaagatatcgaacaagacgctcttgctcctgttattaggaacaaa
ctaaaaggtaacttgaaggttgcagccattaaagctcctgcctttggagagcgcaagagt
cactgcttagatgatcttgcaatctttactggagctaccgtgatcagagatgagatggga
ctgagcttagaaaaggctggaaaggaggtcttaggaacagcaaaaagggttcttgttact
aaagattcaacactgattgttacaaatggagacacccagaaagcagttgacgaaagggtt
tctcagattaaaaatcttatccagaacaccgaggagagttttcagaagaagatcctcaat
gaaagagtagcgagattatctggtggaattgcaataatccaggtaggtgcacagacacaa
gttgagttgaaggataaacagctaaaagttgaagatgccctgaatgcaactaagtcagca
attgaagaagggattgtagttggtggtggttgcgccctcttgcgactggcttcaaaagtg
gacaaaatcaaagatacccttgacaactcggaacagaagattggagctgaaatattcaag
aaagcgttgagctaccccataagactcatagccaaaaacgcaggcacaaatggaaatatc
gtcatagaaaaggtgttatcgaacaaaaacactatgtacggttacaatgctgcaaagaat
caatatgaagatctgatgttggctggtataatcgatccaaccaaggttgtaagatgttgc
ttggaacacgctgcatcagtggctcaaacctttctgacatcggattgtgttgtagttgag
atcaaagaaatcaaacccagaccaatcattaatccaccattgcctacttctcctccagct
acctcctccatgttccctgacagaaaactgccaagatttcctcaaattacgccaagaact
cgaagccactttccaagaaagtag
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