Camelina sativa (false flax): 104756932
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Entry
104756932 CDS
T05044
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104756932
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104756932
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104756932
03036 Chromosome and associated proteins [BR:
csat03036
]
104756932
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104756932
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104756932
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104756932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Htt_N-HEAT_1
HEAT_EZ
Vac14_Fab1_bd
PDS5
SCD
Adaptin_N
CLASP_N
TAF6_C
Cnd1
CEP104-like_TOG
Cobl
Motif
Other DBs
NCBI-GeneID:
104756932
NCBI-ProteinID:
XP_010477897
LinkDB
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Position
17:complement(12863582..12867878)
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AA seq
588 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENSDDD
DEVLLAMAEELGVFIPFVGGIEYAHVLLPPLESLCTVEETCVREKAVDSLCKIGSQMRES
DLVDSFVPLVKRLAAGEWFAARVSACGIFHVAYQGCTDVLKTELRSTYSLLCQDDMPMVR
RAAASNLGKFATTVESTYLIAEIMTMFDDLTKDDQDSVRLLAVEGCAALGKLLEPQDCVA
RILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDCTKTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRLLNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDSTIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
VPLLASQLGIGFFDDKLGALCMQWLQDKVYSIREAAANNLKRLAEEFGPEWAMQHLVPQV
LDMVNNPHYLHRMMVLRAISLMAPVMGSEITCSKFLPVVVEASKDRVPNIKFNVAKLLQS
LIPIVDQSVVDKTIRQCLVDLSEDPDVDVRYFANQALNSIDGTTAAQS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtagatgaaccgttgtatcccattgctgtgctcatagatgagcttaagaat
gatgatattcagcttcgtttgaactccatccgtcgtttgtctacgatagctcgtgctctt
ggagaggagcgtacaaggaaggaattaatcccttttctgagtgagaacagtgacgatgac
gacgaggtgctccttgctatggctgaggaattgggagtttttattccgttcgttggagga
attgagtatgctcatgttcttctccctcctttggaatctctctgtactgttgaagagacc
tgtgtgagagaaaaagctgtggattcgctttgtaagattggatctcaaatgagggaaagt
gaccttgttgattcctttgttcctcttgtgaagagactggcagctggtgaatggtttgca
gcaagagtttccgcatgtggtatattccatgttgcataccaaggttgcactgatgttctg
aagacagagttacggtctacttatagcctgttgtgccaagatgatatgccaatggtgcga
agagctgctgcatctaacctggggaaatttgccactactgtggagtcaacctatttgatt
gctgagatcatgactatgttcgatgatctcactaaagatgatcaagattctgttagactg
ttggctgtcgaaggctgtgcagctctgggaaagttgctcgaaccgcaggattgtgttgca
cgcattttacctgttattgtcaatttctctcaggataaatcttggagggtgcgttacatg
gttgctaatcagctatatgaactttgcgaggcagtgggtcctgattgcaccaagacggat
ttggttccagcatacgtgagattgttacgggacaatgaggcagaagtgcgaatagcagca
gcaggaaaagtgaccaagttctgtcgtcttttgaatcccgagcttgctattcaacacatc
cttccttgtgtgaaggaattatcatcggactcttctcaacatgttcgatctgctttagct
tcagtaataatggggatggctcctatccttgggaaggattcaaccattgagcatctgtta
ccaatttttctttctctattgaaagatgaatttcctgatgttcgcctcaacatcataagc
aagcttgatcaagtcaaccaggttattggaattgatttactatcacaatcattgttgccg
gcgattgtagagcttgctgaggatcgacactggagagtccggcttgcgataatagagtat
gttcctctgttggccagccagttaggtatagggttttttgatgacaagcttggagccctt
tgcatgcaatggctgcaagacaaggtttactccatccgtgaagctgcagcaaacaaccta
aagcgtctcgcagaggagtttggtcctgaatgggcaatgcaacatttagttccccaggta
ctggacatggtcaacaatccgcactacttacataggatgatggttctacgtgcaatatct
cttatggctcctgtaatgggatcagaaatcacatgctctaagtttcttcctgtggttgtt
gaagcatcaaaagacagagttccaaacattaagttcaacgttgccaaacttctgcaatcc
ctcatccccatagtcgaccaatcagtggtggacaagacaatccgtcagtgcttggtggac
ctgagcgaagaccctgatgttgatgttcgctattttgcaaaccaagcgcttaattccatc
gatggtaccacagcggcgcaatcttga
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