Camelina sativa (false flax): 104757133
Help
Entry
104757133 CDS
T05044
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00600
Sphingolipid metabolism
csat01100
Metabolic pathways
Module
csat_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
104757133
Enzymes [BR:
csat01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
104757133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
104757133
NCBI-ProteinID:
XP_010478151
LinkDB
All DBs
Position
17:13884506..13888632
Genome browser
AA seq
544 aa
AA seq
DB search
MDSFSYSSMKSMVIQARGSLNSRLSDFEPLFLLLAPLLTLFLAQIIGSVLGVVNDKGLKA
CLVGFIMGFLKMIPGVQNYIDAEKQKVVDQLQSGSSSKKKNWAETLPVKGLGVEVLDKME
IEKRNDAIWQGKCSGTVYIGGGESEGHFALINQACSMFAHTNPLHIDVFQSVVRFESEVV
AMTAALLGSKETVSGEQICGNMTSGGTESIVLAVKSSRDYMKYKKGITRPEMIIPESGHS
AYDKAAQYFNIKLWRVPVDKEFRADVKAIRRHINRNTIMIVGSAPGFPHGIIDPIEELGQ
LALRYGICFHVDLCLGGFVLPFARKLGYQIPAFDFTVEGVTSISVDVHKYGLAPKGTSTV
LYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLVAGAWAAMMSLGEEGYLQNTSNIM
EASKRLEKGVREIHELFVIGKPDMTIVAFGSKALDIFEVNDIMSSKGWHLNALQRPNSIH
ICITLQHVPVVDDFLQDLREAVETVKANPGPITGGLAPIYGAAGKMPDRGMVNELLVSFM
DSQY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggattccttttcatattcttcgatgaaatcaatggtgattcaagctcgaggctcgtta
aactcgcgtttgtctgactttgagcctctgtttctgcttttggctccccttctcactctt
ttcctcgcccagatcatcggatctgtcttgggcgttgtgaacgacaaagggttaaaagcg
tgtcttgtcgggtttatcatgggattcctcaaaatgatccctggagttcagaattacata
gatgctgagaaacaaaaggttgttgatcaattacaatctggtagtagctctaagaaaaag
aattgggctgaaacattgccagtaaaaggtctaggagttgaagttcttgacaaaatggag
attgaaaaaaggaatgacgctatttggcaaggaaaatgctctggcactgtatacattggt
ggaggcgagtctgaaggacattttgcattgataaatcaagcatgttcaatgtttgcgcat
accaatccattgcatatagacgtattccagagtgtggtgcggtttgagtcagaagtagtc
gcaatgactgctgcgttactcgggagtaaagaaacggtttcaggagaacaaatatgtgga
aacatgacgtctggaggaacagaaagtatagtgttggctgtgaagtcatctcgtgactat
atgaagtacaagaagggtatcacacggccagaaatgattatacctgaatcgggtcattcg
gcttatgataaggcggctcagtacttcaacatcaagttgtggcgagttccggtagacaaa
gaattccgagctgatgtgaaggcaataaggcggcatattaacagaaacaccatcatgatt
gttggatcagcaccaggattccctcatggcatcatcgatcctattgaggagcttggtcaa
ctggctcttagatatggaatatgctttcatgttgacctttgccttggtggttttgtgtta
cctttcgctcgcaaacttgggtaccagatcccagcttttgattttactgtagaaggagtt
acttcaatttcggtggacgtgcataaatatggtttggctcctaaaggaactagtacagtt
ctctacagaaatcatgagatcagaaagcaccaatttgttgctgtaactgaatggtcagga
ggtctatacgtgtccccaactatagctgggagtaggcctggttctttggttgctggtgct
tgggctgcaatgatgtctctgggcgaggaaggctacctacaaaacacaagcaatataatg
gaggcatcaaagagactagaaaaaggcgtaagagaaatccatgaactgttcgtcattgga
aagccagatatgacaattgtggcgtttggttctaaagcattagatatctttgaagttaat
gacatcatgtcttcaaaaggttggcatttgaatgcactacagagacccaacagcattcat
atatgtataactcttcaacacgtccctgtagtcgatgacttcctccaggatctgcgtgaa
gctgtagaaactgtgaaagcaaacccaggaccgatcactggaggcttggctccaatatat
ggagctgcagggaagatgccagatcgaggaatggtgaatgagcttctggttagtttcatg
gacagtcaatactaa
DBGET
integrated database retrieval system