Camelina sativa (false flax): 104757142
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Entry
104757142 CDS
T05044
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104757142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104757142
Spliceosome [BR:
csat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
104757142
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
104757142
NCBI-ProteinID:
XP_010478161
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Position
17:13986147..13990715
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AA seq
785 aa
AA seq
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MDKERYSRSHRDDRDRDRDSSPEHSPQREGGRRRDRDGDSKRRDSDHYRSSRREDREDER
DRGKERGRRSVERGEREGSRDRERHHHERSHEGTKEKEPRSKRKDRDEENGARDGKKKSR
FSDGNGERKSRFEDVAMESENKSAHVTEGSGAMNPTSGVSIGASSITSVASEASLAPSQT
LLTKVSSIYTTDENKASIVGSHEVPGKSSTDGRPLSTAGKSTPNLSSDALAKAKKALQFK
HKGLADKLKKLPLLNKGTKSTSEGTPNTRVQSSTTTPAVSTGTSFASAVPHSGLAGLGSI
NIEAVKRAQELAANMGFLPDRNYGPVLNLFSGQASSDTAVAERPAKPPVLRVDALGREID
EHGNVISVTKPSNLSTLKVNINKQKKDAFQILKPQLEEDLKEDPHFDPRMGIDVKKIVRP
KRMTFQFVEEGKWTRDAESLKLKSQFGEAKERELKVKQAHLAKAKDDINPNLIEVSERVP
RKEKPKESIPDVEWWDANVLVNGEYSDIADGIITESYLKIEKLTHYIEHPRPIEPPAEAA
HPPPQPLKLTKKEQKKLRTQRRLAKEKDKQEMIRQGLLEPPKAKVKMSNLMKVLGSEATQ
DPTKLEKEIRTAAAEREQAHTDRNAARKLTPAEKREKKERKLFDDPTTVETLVSVYKIKK
LSHPKTRFKVEMNARDNRLTGCSVMTEGMSVVVVEGKSKAINRYGKLMLRRINWEEAEKK
EEKDDEEEEANGENKCWLVWQGSVAKPSFHRFHVQECLTESSAKKIFIDAGVVHYWDLAV
NYSDD
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggataaggagagatattccaggagccaccgtgacgatcgtgatcgtgatcgtgattca
agtcccgaacattctccgcaacgtgaaggcggacgccgacgagatcgcgatggtgattcg
aagcggcgtgattcagaccactaccgctcatcgaggcgcgaggatagggaggatgagaga
gataggggtaaggagagaggtcggagatctgtagagcgaggcgagagggaagggagtaga
gatagggaaaggcatcatcatgagaggtctcacgaaggaactaaagagaaggaaccgagg
agcaagaggaaagatagagacgaggagaatggggctagggatgggaagaagaaatctagg
ttttctgatgggaatggtgagaggaagagcaggtttgaggatgtggctatggaatctgag
aacaagagtgctcacgtcactgagggttctggggctatgaatcctactagcggcgtttcg
attggcgcctcttcaattacttctgttgcatcggaagcttctttggctcctagtcaaacc
ctgctcactaaggtatcttcgatatatacaacggatgaaaataaggctagtattgtcgga
tctcatgaggttcctggaaaatctagtacagatggaagaccattgtcaacagctgggaaa
agtactccaaacttgtcttctgatgcgttagccaaagctaagaaagctctacagttcaag
cacaaaggattggcggataaattgaagaaacttcctttgttgaacaagggtactaagtca
acttcagaaggtaccccaaataccagagtacaatcatcgactaccactcctgctgtctct
acaggaacctcttttgcatcagcagtgccacattctggccttgctggtcttgggagtatt
aacattgaagctgttaagcgagctcaggagctggcagctaacatgggatttcttccggat
cgaaactatggtcccgttctcaacctattttcgggacaagcatcctcagatacggctgtt
gcagagagacccgccaagccccctgttctgcgtgtggatgcactaggaagggagattgat
gaacatggaaatgttattagtgtgactaaaccaagcaatcttagtacattgaaggttaac
attaacaaacagaagaaagacgcctttcagattcttaaacctcaactggaagaagatcta
aaagaagacccccattttgacccacggatgggtattgatgtaaaaaagattgtgagacct
aaacgtatgactttccagtttgttgaggaaggtaaatggacaagagatgctgagagtttg
aagttaaagagtcaatttggtgaagcaaaagaaagggagctgaaggtgaagcaagcccat
ctggcaaaggcaaaggatgatataaatccaaatttgatagaggtatcagaacgtgtcccg
agaaaagagaagccgaaggagtcaattccagatgttgagtggtgggatgcaaatgtcctc
gtcaatggcgaatacagtgacatagccgatggcattattaccgaaagctatcttaagata
gagaaacttactcattacattgagcatcctcgtcccatagagccacctgcagaggcagcg
catccaccaccccaacctctcaaactgacaaagaaggaacagaagaaactgcggacacag
aggcgtctagcaaaagaaaaggataaacaggagatgatccgacaagggttgcttgaacca
ccaaaagcaaaggtgaagatgagcaacttgatgaaggttcttgggtctgaagcgacccaa
gacccaaccaagcttgaaaaagagatccgcacagcagctgcagagcgtgagcaggctcat
acggacaggaacgcagcccggaagctaactcctgcagagaaacgtgagaagaaagagagg
aagctatttgatgatccaacaacggttgagacacttgtgtcggtgtacaagatcaagaag
ctatcgcatcctaaaacaagatttaaagtggagatgaatgcaagagacaacagactaaca
gggtgtagtgtgatgacggagggaatgagtgttgttgtggttgagggcaaaagcaaagcg
ataaatagatatgggaagctgatgctgaggcgaataaactgggaagaggcagagaagaag
gaagagaaggatgacgaggaagaagaggcgaatggggaaaacaaatgttggttggtttgg
caaggaagcgttgcgaagccgagttttcataggtttcatgtacaagaatgcttgaccgaa
tcatctgccaagaaaattttcatagatgccggtgttgttcactactgggatctcgccgtc
aattactcagacgactaa
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