Camelina sativa (false flax): 104757333
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Entry
104757333 CDS
T05044
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104757333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104757333
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104757333
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104757333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
104757333
NCBI-ProteinID:
XP_010478367
LinkDB
All DBs
Position
17:complement(15637225..15644404)
Genome browser
AA seq
1190 aa
AA seq
DB search
MVVNAKDSTVPNVEDFRELHNLVTHHIESFDYMTDKGLDVMFNRIKPVTVYDSDSDNNLS
IWLENPVVFAPQKESLSSTSRKDSLFPFEARQAKISYTGAFMADVCFKYNDGVVVRDKFD
FGQFPIMLMSKLCSLRGADCRKLLKCKESTSEMGGYFVLNGIERVFRCVIAPKRNHPTSM
IRSSFRDRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGGREYLLPVGLVL
KALTETNDEEIYKCLNCCYNENYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKH
LGEHFQPVLDGLEKEKYPTVAEAVLRDFIFVHLDNDDDKFNLLIFIIQKLYSLVDQTSLP
DNPDSLQNQEILVPGHLITIYLKEKLEDWLRKCKSLLKDELHNKSSKSKFSFESLADVKK
VINKNPPRSIGTSIETLLKTGRMNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGA
SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTSRITSQFDSKGNIRDFLKI
RKSVVEVLVGVGMVPSLPKLVRAAPPEVIHVLLDGQVVGTLSSNVVTDVVSYLRRLKVEA
PSVIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSENIELIGPFEQVFMEI
SCPDGGNGGRNNSCPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYST
QALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILN
KSSVERGMCHGQIYQTETIDLSDQNSRYDSGHKSFRRSHADKSVHSSIDADGLPYVGQKI
YPDEPYYSVYDEVTSRIRTTRRKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPIIGD
KFSSRHGQKGVCSQLWPDVDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSL
HGKFVDATPFRNAMKKPNGDKESKSSLLVDDLGSMLTEKGFNYYGTEKLYSGLLGVELEC
DIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGA
SYLLHDRLHTSSDHHIADVCSLCGSLLTSSIVNVQQKKLIQVAGKLPPGRTPKKVTCHSC
KTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSEREGATDEDLIPEEEK
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgaacgcaaaagactcgacggttcctaatgtcgaagacttcagggagcttcac
aatctcgtcacgcatcatatagagtcgttcgattacatgacagacaaaggtctcgatgtt
atgttcaatcgaatcaaacccgttactgtctacgattcagactccgacaacaacttgagc
atctggttagagaatcctgtagtattcgctcctcagaaggagagtttgagttcaacatca
aggaaagattctttgtttccctttgaggctaggcaggcgaagatttcgtatacaggagcc
tttatggctgatgtttgctttaagtataatgatggagttgttgtcagagacaaatttgat
tttggccaatttcccattatgcttatgtcaaagctttgcagcttaagaggtgctgattgc
cggaaactgttaaagtgtaaagagtcaacttctgaaatgggagggtactttgttttgaat
gggatcgagagagtgttccgatgtgttattgcacctaagcgaaaccatccaacaagtatg
atccgaagctcattccgtgatcgtcgggaaggatacagtgacaaggcagttgccattagg
tgtgtaagagacgaccagtcatccgtcactgttaaactgtattatcttcgcaatggaagt
gccagagttggattttggataggaggaagggaatatttgcttcctgtcggtcttgttctc
aaggctctcactgaaaccaacgatgaggaaatatataaatgcctaaactgttgctacaat
gagaattatggaagaggcgatggagctattggaacccaactcgttcgtgagagagccaaa
attattcttgatgaagtgcgagacttgggtctttttacccgggaacagtgccggaagcac
ttaggagaacattttcagcctgttcttgatgggttagaaaaagaaaaatatcctactgtt
gctgaagctgtgctcagggattttatatttgttcatcttgacaatgatgacgacaagttc
aatttgctcatcttcataattcagaagctctattctttggtggatcagacatctttacct
gacaatccggattctttgcaaaatcaggaaattttggtcccaggtcaccttataactatt
tacctcaaggaaaaacttgaagattggctgcggaagtgcaaaagtcttcttaaagatgag
ttgcataacaagagctcgaaatcaaaattttcctttgaaagccttgctgatgtcaagaag
gttattaacaaaaatcctcccaggagtattggtacgtcaattgaaacattgttgaagaca
ggaagaatgaatacccagtctggtttggatttacagcagagagcaggttacactgttcag
gctgagagattgaactttctccgtttcctttcatttttccgggcggttcatcgaggtgct
tcttttgctggacttcgtacaacaactgtgaggaagctgcttcctgaatcttgggggttt
ctttgccctgttcacactcctgatggggaaccttgtggattactgaatcatatgactcgt
actagccgaatcacttctcagttcgactcaaagggaaacatcagagattttctgaaaata
agaaagtcagttgttgaggttcttgttggggtgggtatggtaccttcattgccaaagcta
gtacgagcggcaccaccagaagtcattcatgttcttttagatggtcaagttgtaggcacg
ctatcttctaacgtagtcacggacgttgtctcctatttgcggagactgaaagtggaggct
ccttcagtgattcctgaagatctcgaagtgggatatgtacctacaagcatgggtggatct
tatcctggattgtatttggcatcatgtcctgcaagattcattaggcctgttaaaaatata
tctataccttctgaaaatattgaacttattggaccgttcgaacaggtttttatggaaata
agctgtcctgatggaggaaatggaggaaggaataactcttgcccagcaactcacgaagaa
attcatccaactgggatgataagtgtggttgctaatcttacaccttggtcagatcataac
caaagtccgcgtaacatgtatcagtgtcagatggcgaaacaaaccatggcatactctact
caagctctccaatttcgtgccgaccagaagatttaccatttgcagactcctcaatcccct
gttgtgcgcaccaaaacatacaccacttacagtattgatgagaatcctacagggactaat
gcaattgttgctgtcctcgctcatacaggatttgatatggaagatgctatgattttgaac
aaatcatctgtggagcggggaatgtgccatgggcaaatataccagacagaaactattgat
ctgtcagatcagaatagccgatatgatagtggtcataaaagttttaggaggagtcatgct
gacaaatcagttcattctagtatcgatgctgatggattaccatatgttgggcagaaaata
tatccagatgagccgtattatagtgtctatgatgaggtaactagcagaataaggaccacg
aggcgaaaaggtaccgaccctgtcatagttgactttgtctctgttgacatgaaaagcaag
aaacatcctcaaaaggcgaatattcgtttccggcatgcaagaaaccccataattggagac
aagttcagtagtagacatgggcaaaagggtgtttgttcccaattgtggcctgatgttgat
atgccgtttaatggagttactggcatgcgtccagatctcatcattaaccctcatgctttc
ccatcaagaatgacaattgctatgcttttggaatctattgctgctaagggaggtagtctg
catggaaagtttgtcgatgcaacgccgtttcgtaatgcaatgaaaaaaccaaatggagat
aaggagagcaagtccagtttgcttgttgatgatctcggttccatgttaactgaaaaaggg
ttcaactactatgggactgagaaattatatagtggacttttaggagtagaactggagtgt
gatatatttatgggccctgtttactaccaaagattgcgtcacatggtctcagacaaattc
caggttaggtccactggacaagtggatcaactaactcatcagccaatcaagggaaggaaa
cgaggtggagggattcggtttggtgaaatggaaagagactcactacttgctcatggagct
tcctatctattacacgacaggcttcacacttcttcagatcaccacattgcagatgtatgt
tcactgtgtggaagcttgctcacttcgtctattgtgaacgttcaacagaagaagctaatt
caagttgctggaaagttacctcctggtagaactccaaagaaggtaacttgccattcctgt
aagacaagtaaaggcatggaaacagttgcaatgccatatgtgttcagatacttggctgca
gagttggcttcaatgaatattaagatgactcttcagttgagcgagagagaaggagcaacc
gatgaagatttaataccagaggaagaaaagtaa
DBGET
integrated database retrieval system
