Camelina sativa (false flax): 104757794
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Entry
104757794 CDS
T05044
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34 isoform X2
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104757794
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104757794
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
104757794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
RQC
ResIII
Vps5
SecA_DEAD
DegS
Motif
Other DBs
NCBI-GeneID:
104757794
NCBI-ProteinID:
XP_010478886
UniProt:
A0ABM0X0M5
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Position
17:21254617..21263020
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AA seq
707 aa
AA seq
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MESEAIQEELQNLDVELKDVQGQISALIEHQDRLYERKSELKTLLKALAASESPVASSSG
GSTVIENWSEAFEWDSRADDVRFNTFGISEYRANQKEIINAIMLGRDVLVIMAAGGGKSL
CYQLPAILRGGTTLVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGE
DDLKILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSIL
KTQFPKVPMVALTATATQKIQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKVVV
DEIADFIRESYSNNESGIVYCFSRKECEQIASDLRERGISADYYHADMDVNMREKVHMRW
SKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRS
ADVPRQSSMVFYEYSGLKNLYDIVRYCQSKTKCRRSAFFRHFGEPSQDCDGMCDNCALSS
ELKEVDVSDLAKLVVSMVQETQAKDQRVTMLQLGDKLRNKHKDLSAELKRDEIEHLVIKL
IVDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGRKTIKMETSSKQIKKSKRSISFSGLEL
KLDELRKEISAADGNILPHTVLSTQQIGSISSQKPDSLQELEKIIGKLKTEKYGDRILEE
VMRHDVVSEDIVEDPTKEGACESRSRKRAKTQKDVVLVDSSDEDEEA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaagcgattcaggaagagcttcagaatttagacgtcgagttaaaggatgtt
caaggtcagataagtgctttgattgagcatcaagataggttatacgagaggaagtctgag
ttaaagacactgttaaaagcactagcagcatcagaaagccctgttgcgtcatcatctggt
ggctctactgttatagagaattggtctgaggcgttcgagtgggattctcgtgctgatgat
gttaggtttaacacttttggtatatccgagtatagggctaaccagaaggaaattattaac
gctataatgttgggaagagatgtactggtgatcatggcagcaggtggtgggaagagtctt
tgctatcaacttcccgctatacttcgtggtggtacaactcttgttgtcagtcctttactt
tcactcattcaggatcaggttatgggtttggctgctctaggaatttcagcatacatgctg
acctctacttctggcaaggaaaatgagaaatttgtgtacaaagcacttgaaaagggtgaa
gatgacctcaagatactttatgtaacaccggaaaaggtatcaaagagcaaaaggttcatg
tcgaagcttgaaaagtgtcataatgctggtcgcctctctcttatatcaattgatgaggct
cattgttgtagtcagtggggtcatgattttcgccctgattacaagaacttaagcattcta
aaaacccagtttcctaaagttcccatggtggctttaactgcaactgctacacagaagatc
caaaatgatctgatcgaaatgctgcatattcctaaatgcgtcaaatttgttagcagtgtt
aacaggccaaatctcttttactcggtgcgagaaaaatcggcagttggtaaagtagtggtt
gatgaaattgcagatttcatacgggaatcatactctaacaatgaatctggaatagtctac
tgcttctcacggaaggaatgtgaacagattgcaagtgatttacgagagagaggtatttct
gctgattattaccacgctgatatggatgtaaatatgcgcgaaaaagttcatatgcgatgg
agcaagaacaagttgcaggtcattgttggaacagttgcctttggcatgggaatcaacaag
cctgatgtcaggtttgtcatccaccacagtttgagcaaatcgatggagacttactaccag
gagagtggccgtgccggtcgtgatggcctcccatctgaatgcatcctcttttttcgctcg
gctgatgttcccaggcagagttccatggtcttctacgagtattctggtctgaagaatctc
tatgatatagtaagatattgtcagtctaaaaccaaatgccgtcgaagtgcttttttccgt
cattttggggagccatcacaagattgcgatggaatgtgtgacaactgtgccttgtcaagt
gagcttaaggaagttgacgtatcggacctagctaagctcgtggtttctatggtgcaagaa
acgcaagccaaggatcaaagagtgacgatgttacagctgggtgacaaactcagaaataag
cacaaggatctaagtgctgagttaaagagagacgagatagaacatcttgtgataaaactg
attgttgactcggtattgaaagaagaattccagcacacaccatactcgacaaacgcttat
gtaacaatgggaccgttggccaaccaactgttgcaaggaagaaagacgatcaaaatggaa
acctcaagcaaacaaatcaagaaatcgaaaagaagtatttcattttccgggttagaactt
aagcttgacgagctacggaaggagatatccgcagctgatggaaacatactccctcacacg
gtcctctcaacccagcagattggctcgataagttcccagaaaccagattcattacaagag
ttggagaaaattataggaaagttaaagacagaaaagtatggagataggattctagaagaa
gtgatgagacacgatgtagtctctgaagacattgttgaagatccaacaaaggaaggggca
tgtgaaagcagatcaagaaagagagctaagacacagaaggatgttgttttggtagacagc
agcgatgaagatgaagaagcttga
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