Camelina sativa (false flax): 104757912
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Entry
104757912 CDS
T05044
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104757912
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104757912
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RRM_PARP14_3
RL
Nup35_RRM_2
TGF_beta
Phage_tail_terminator_5
DUF3587
UNC45-central
Motif
Other DBs
NCBI-GeneID:
104757912
NCBI-ProteinID:
XP_010500100
UniProt:
A0ABM0YFD4
LinkDB
All DBs
Position
3:complement(19313492..19317739)
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AA seq
433 aa
AA seq
DB search
MAESSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVSALQF
FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV
FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL
QVNYNNDRSRDYTNPNLPAEQKGRSSHPGGYGDVGVAYPQMANTAAIAAAFGGGLPPGIT
GTNDRCTLLVSNLNADSVDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAV
HFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAAKNYRYCCSPTKMIHL
STLPQDVTEEEVVNHVQEHGAIVNTKVFEMNGKKQALVQFESEEEAAEALVCKHATSLGG
SIIRISFSQLQTI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatcttccaaagtcattcatgttcgtaatgttggtcatgagatttctgaaaat
gatttgcttcagctttttcaaccatttggggttataactaagcttgtcatgctcagggct
aagaatcaggctcttctccaaatgcaagatgttccttccgcagtcagtgcccttcagttt
tttactaatgtgcagccaactataagaggtaggaatgtgtatgtccagttctcttctcat
caagagttgacaactatagagcagaatattcatggacgggaagatgagccgaatcgtatt
ctcttagtcacaatccatcacatgctgtatccaattactgttgacgtgctgcatcaagtt
ttttctccttatggatttgtcgagaagctcgtcactttccagaagtctgctggctttcaa
gctcttatacagtatcaggtacaacagtgtgctgcctctgctagaactgctctacagggt
cgtaacatatatgatgggtgttgtcagttggatattcagttctcaaatcttgaggagctg
caagtaaattacaacaatgatcgatctagggattatacaaacccaaacctgccagcagag
caaaaaggccgatcatcgcatcctggcggttatggtgatgtaggagtggcatatcctcag
atggcaaacacagccgcaattgcagctgcctttggaggaggcttgcctccgggtataact
ggcacaaatgataggtgtacattgcttgtctccaatctgaatgcggatagtgttgatgag
gataagctattcaatctgttttctctttacgggaacattgtaaggattaagcttcttcgg
aacaaacctgaccacgcccttgtccaaatgggtgatggtttccaagctgaacttgcagta
catttcctcaagggagcgatgctgtttggtaagcggctagaagtaaacttctcgaagcat
ccaaatataacaccaggcacagactcccatgattatgtaaactcgaacctgaaccgcttc
aaccgcaatgctgcaaagaactaccgctattgctgctcccctacaaagatgattcacctg
tcgacacttcctcaagacgtgacagaggaggaagtggtgaaccatgtgcaagaacacggg
gcaatagtgaacacgaaagtgtttgagatgaacgggaaaaagcaagctctggtacagttt
gagagtgaggaggaagctgcggaagcattggtgtgcaagcacgcgacttctctaggcgga
tcaattatcagaatctccttctcccagctacagacgatttaa
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