Entry |
|
Name |
(RefSeq) THO complex subunit 5A
|
KO |
|
Organism |
csat Camelina sativa (false flax)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:csat00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104757992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csat03019]
104757992
03041 Spliceosome [BR:csat03041]
104757992
Messenger RNA biogenesis [BR:csat03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104757992
Spliceosome [BR:csat03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104757992
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
17:25272179..25274090
|
AA seq |
450 aa
MQSEMANDTVATAEKSPVELLQETKAYIEAIVERMLSITQQGNPKSENRELLTQMFLNFI
NLRQANRAILVEEEKAKTETELAKSPVDFTTLELHNLMYEKSRYLKANKASRDFKSRYPN
IDLISEQEFFSEAPEAIKSQTLSNDTSHDLMLKRLNFELHQRKELCKLRARLEQHKKSLL
ESNAERNKFLSSLPVHLKSLKKASLPVQSQLSLPNPKKLKYHNLAELLPPPLYVIYSQFM
ARKEAFEENIDLEVSGSLKDAQTYARQQAEQNSESLRLEDDGKRQRKRPKKEVSDEGGLY
QSHPLKVVLHIYDVEIPDPKSDRPVLLKFEYLLKLNVVCVGIEESQDDLEKNILCNLFPE
DAGLEPPHQSAKLILGDDHLFDESRTSRPYKWAQHLAGIEILPEMSPFFTDKDTQTSDTA
VDYASASDHRNVQTVLQRIRSQKKTKLTLV |
NT seq |
1353 nt +upstreamnt +downstreamnt
atgcaatcggagatggcgaacgacacggtggctacggcggaaaaatcaccggtagagcta
cttcaagagaccaaagcctacatcgaggccatcgtcgagaggatgctctcaatcacgcaa
caaggaaaccccaaatccgagaatcgcgaactcctcactcagatgtttctcaatttcatc
aatctgcgtcaagcgaatcgcgcgattcttgtagaggaagagaaagcgaaaactgagact
gagttagcaaaatctccggtggatttcacgacattggagcttcacaatctcatgtatgag
aagagccgttacctcaaagctaataaagccagtagagatttcaaatctaggtatcccaac
atcgatctcatatctgaacaagagttcttcagtgaagctcctgaagcgatcaagtctcaa
actctttcaaatgatacttctcatgatttgatgcttaaaagactcaactttgagcttcat
cagaggaaagaactatgcaagcttagagcgaggttggaacaacataagaagagtttgctg
gaaagtaatgcagagcgtaacaagtttctgtcgagtcttccagtgcatctcaaatctttg
aagaaagcatctttgccagtacagagccagctgagtttgccaaatccgaagaagctgaag
tatcataacttagctgagcttcttcctccgccgctttatgttatatattcgcagttcatg
gcacgaaaggaagcttttgaagagaatatagatctcgaggtatctgggagccttaaggat
gctcaaacttatgcccgccagcaggctgaacagaactcagagagtctaagattggaggat
gatggaaaaaggcaaaggaaacgacccaagaaagaggtttctgatgagggaggactatat
cagagtcatcctcttaaagttgttcttcacatatatgatgttgagattccagatccgaaa
tccgatagacctgtcttgctcaagtttgagtacttgttgaagttgaacgttgtatgcgtt
ggcattgaagagtctcaggatgaccttgagaaaaatatactatgtaacttatttccagaa
gatgctggtcttgagcctcctcatcagtcagcaaagctcattcttggcgatgatcattta
tttgatgagagcagaacttcgaggccatataagtgggcacaacatttggcggggattgag
attttacctgagatgtcaccattttttactgacaaggatactcaaactagtgatacagct
gttgactatgcttctgcgtctgatcaccgcaatgtgcaaacagttctgcaaagaatacgg
tcccagaaaaagactaagctaactcttgtctga |