Entry |
|
Name |
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80-like
|
KO |
K10885 | ATP-dependent DNA helicase 2 subunit 2 |
|
Organism |
csat Camelina sativa (false flax)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:csat00001]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104758100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:csat03400]
104758100
DNA repair and recombination proteins [BR:csat03400]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
104758100
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
17:26942606..26946225
|
AA seq |
681 aa
MARNREGLVLLIDVGPAMHSVLPDVEKACSLLLQKKLIYNKYDEVGIVVFGTEETGNELA
REIGGYEHVKVLRNIRVVDEVVAEHVKQLPRGTVAGDFLDAVIVGMDMLIKMYSGGQKGK
KRMCLITNAACPTKDPFEGTKDDQVSTIATKMAAEGIKMESIVMRSNLIGDAHEKVIEEN
DHLLNLFSSNAIAKTVNVESPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVA
EERLPTLQLYSDKAPPTDKFAKHEVKIDYDYKVTAESTQVIAPEERVKGFRYGPQVIPIS
PDEIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPSKEKSVLAVSAIAREMKE
TNKVAIVRCVWRNGQGNVVVGVLTPNVSERNDTPDSFYFNVLPFAEDVREFPFPSFNKLP
SSWKPDEQQQAVADNLVKMLDLAPSAKEEVLLPDLTPNPVLQRFYEYLELKSRSTDAALP
PMDETFKRIMEQDPELSSNNKSIMDAFRASFEVKENPKLKKASKRLLRDKPSGSDDEDNR
MITYDANENKIDVVGDVNPIQDFEAMISRRDNHDWATKAITQMKNRIVKLVENCTDEGDK
ALECVLALRKGCVLEQEPKQFNEFLNHLFELCQERKLSHFLKHFTSKKITLIPKSEAPDS
DVVDENAGDYFTVKPEPMLES |
NT seq |
2046 nt +upstreamnt +downstreamnt
atggctcgaaatcgggaagggttagttttgttgatcgatgttggcccagcgatgcatagt
gttctccctgatgttgaaaaagcatgttctttgctactacaaaagaagttgatttacaac
aagtatgatgaagttggaattgttgtatttggaactgaagaaaccggaaacgagcttgct
agggaaataggtggatatgagcatgttaaagttttaaggaatataagagttgttgatgaa
gttgtggctgagcatgtaaaacagctacctcgaggaaccgtagctggcgactttcttgat
gctgtgattgttgggatggatatgctaataaagatgtatagtggtgggcaaaaggggaaa
aaacggatgtgtctcatcacgaatgctgcttgtcctaccaaagatccatttgaagggacg
aaagatgatcaagtcagcactatcgctacgaaaatggctgcagagggtataaagatggaa
agcattgtcatgaggtccaatttaattggtgatgctcatgagaaagtgattgaggagaat
gatcatttgttgaatttgttctccagcaacgccattgcaaaaacagtgaatgttgagagt
ccactctcattgctaggttccttaaagactcggagggttgctccagttactttgttcagg
ggtgaccttgaaattaatccaacaatgaagattaaggtgtgggtttataagaaagtggct
gaggagagacttcccactctacaattgtattctgacaaagcgcctccaactgacaagttt
gcgaaacatgaagtgaaaattgattatgattacaaagttactgcagaatctactcaggtt
attgctccagaagaaagggtcaagggctttcgctatggacctcaagttattcctatatca
ccagatgagatagaaacactcaagtttaaaactgacaaaggcatgaagcttttgggattt
actgaggcatcaaacatactgcgacattattacatgaaagacgtgaatatagttgttcct
gacccgagcaaagaaaaatctgttcttgccgtctcagccattgcaagagaaatgaaggaa
acaaacaaggtagctattgtacgttgtgtctggagaaatggacaaggcaatgtggttgtt
ggcgtcctgactccaaacgtgtctgaaagaaatgacacccctgattcattttacttcaac
gtgctacctttcgccgaggatgtccgcgagtttccatttccttctttcaacaaacttccg
tcatcatggaagccagatgaacaacagcaagcagtagcagataatttggttaagatgctt
gaccttgcaccttctgctaaagaggaagtactactgcctgatcttactcctaacccggtt
ttgcagcgtttttatgaataccttgagctgaaatcaagatccacggatgctgctttacct
ccaatggatgaaacattcaagagaattatggagcaggatcctgaactctcttccaacaat
aaatccataatggatgcgtttcgtgcaagttttgaagtcaaggagaatccgaagttgaag
aaggcttctaagagattgttacgggataaaccatcgggttcagatgatgaagacaatcgc
atgattacttatgatgccaatgagaacaaaattgatgtagttggagatgtaaacccaatt
caagattttgaagctatgatatcccgcagagataaccatgattgggccactaaagcaatc
acacaaatgaaaaaccgaatagtgaagctcgttgaaaattgtaccgatgagggtgacaaa
gcattggaatgtgtactcgctcttcgtaaaggctgcgtcttggaacaggaaccaaagcaa
ttcaacgagttcttgaaccatctatttgagttatgccaagaaagaaaactatcacatttt
ctcaaacatttcacgtcaaagaagatcacattgattcccaaatcggaagcgccagacagt
gatgtggtagacgagaacgctggggattatttcaccgttaaaccagagccaatgctcgag
agctaa |