Camelina sativa (false flax): 104758259
Help
Entry
104758259 CDS
T05044
Name
(RefSeq) elongator complex protein 2 isoform X1
KO
K11374
elongator complex protein 2
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csat03016
]
104758259
Transfer RNA biogenesis [BR:
csat03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
104758259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
NBCH_WD40
TFIIIC_delta
Motif
Other DBs
NCBI-GeneID:
104758259
NCBI-ProteinID:
XP_010479387
UniProt:
A0ABM0X1X1
LinkDB
All DBs
Position
17:complement(28635703..28640271)
Genome browser
AA seq
840 aa
AA seq
DB search
MSENTKVEAKRVFIGAGCNRVVNNVSWGASGLVSFGAQNAVAVFCPKTAQILTTLPGHKA
AVNCTHWLPSSKFAFKAKNLDRHYLLSGDSDGIIILWELSTLHNNQQWRHVLQLPLSHKK
GVTCITAYMVSETDAMFASASSDGVVNLWDVSFPAQSSEECKVVCLDSICVDTKAIVTLA
LAELPQNPGRFALALGGLDNKIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHITEQ
TTDCIMLVSSSQDKVIRIWKLVLVGDVGSWRREITLASYIEGPVFISGTSTYQISVESVL
IGHEDWVYSVEWEPPVINSIDGRLVNHQPLRILSASMDKTMMIWRPEKKTGVWVNVVCVG
ELSHCALGFYGGHWSPNGLSILAHGYGGSFHLWRNVSSSKEAENWQMQEVPSGHFAAVTD
VTWARTGEYLLSVSHDQTTRVFSSWKNEEGNEAEDEHWHELARPQVHGHDINCVAMVQGK
GNHRFVSGAEEKVVRVFEAPLSFLMTLNHTCAGGEGSFPEDLQEDVQVLGANMSALGLSQ
KPIYLHSSSEPLERNGGGDGLDTFETVPEAAPVELKEPPIEDQLAFHTLWPESHKLYGHG
NELFSLCGDHKGNLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDT
MLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTV
KIWSIESDARIKQILALPQFGSSVTAVAWTGLDRKEKSGCVAVGMESGLIELWTIKIIET
EEGTTATAALALRLEPFMCHVSAVNRLVWKPTEKCESNQSLLRLTSCADDNCVRVFDFKF
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaacaccaaagtcgaagcgaagagagtgttcataggagcaggatgcaacaga
gtcgtcaataacgtctcttggggagcttctggtctcgtctcctttggtgcccaaaacgct
gttgctgttttctgccctaagactgcccagattcttactacgcttccaggtcacaaagct
gctgtgaattgcacccattggttgcccagttccaagtttgctttcaaagccaagaatttg
gaccggcattatctgctctcgggtgattcagatggtatcatcatcctctgggaactatct
actcttcataacaatcaacagtggagacatgtactacaactaccactctctcacaagaaa
ggtgtaacttgcatcaccgcttatatggtttctgaaaccgatgcaatgtttgcttctgct
tcttctgatggagttgtgaatctctgggatgtttcttttccggctcagtctagtgaggaa
tgtaaagtggtgtgtctggactccatctgtgttgacactaaagcaattgtaacgcttgca
ttagcggaattgcctcaaaatcctggtcgatttgctctcgcgttgggtggattggacaat
aaaatcaaactttacagtggagaaagaacaggaaagtttacttctgtttgtgagcttaaa
ggccacacagactggattcggagtttggacttctcattaccgttacacataacagaacaa
accacagattgtattatgcttgtgagttcttcccaggacaaagttattcggatctggaaa
ctcgtgttagttggtgatgttggctcatggcgaagagaaatcactctagcttcttacatt
gaaggcccagttttcatctcagggacatccacgtatcagatttcagttgaatctgttctg
attggacatgaagattgggtctattctgtggaatgggaacctccagttatcaattccatt
gatgggaggttagttaaccaccaaccactgcgcattttatcagcttcaatggacaaaacg
atgatgatttggcgacctgagaagaaaactggtgtgtgggtgaacgttgtatgtgttgga
gagctaagtcattgtgctcttggtttctatggtggccattggagcccaaatggtctgtcg
attctggctcatggatatggcggatcttttcatctctggagaaatgtcagtagcagcaaa
gaggctgagaattggcagatgcaggaagttccttcgggtcactttgctgccgtgactgat
gttacatgggctagaaccggcgagtacttgctatccgtgagccatgatcagaccactcgt
gtgttctcatcatggaagaatgaagagggaaatgaagcagaggatgagcattggcatgag
ctggctcgtcctcaggttcacggacatgatattaactgtgtggctatggttcaaggtaaa
ggcaaccaccgttttgttagtggggcagaagagaaagttgtgagagtatttgaggctcct
ctgtccttcttgatgactctgaaccacacttgtgcgggaggagaaggcagcttccctgag
gatttacaagaagatgtacaggtccttggagcgaatatgtctgctcttggattatcacag
aaacctatctacttacactcttctagtgaaccgctggagagaaatggcggaggcgacggt
ctagatacatttgagacagttccagaggcagctccagtggagttgaaagagcctccaatc
gaagatcagcttgcttttcatactttatggccggaatctcataaactctatggtcatggt
aatgaactcttttctctctgcggtgaccacaaaggaaaccttgttgcttcatcgtgtaag
gctcaatctgcatccatggcagagatatggctatgggaggttgggacatggaaagctgtt
ggtcgtttgcagtctcacagcttgacggtgacacacttggagttctcttatgatgacact
atgcttttgtctgtctcaagagatcgtcacttctccgttttctcgatccaaaggacagac
aatggcgaggttagtcacaaactcatggcaaaggttgaagcgcacaagaggatcatatgg
gcatgttcatggaacccatttggccaccaatttgcaacttcatcaagggacaagactgtg
aaaatctggtccatcgagagtgacgctcgcatcaaacagattcttgccttgcctcagttt
gggagcagtgtcacagctgtggcttggacgggattagaccgcaaggagaagagcggctgt
gtggcggttgggatggaaagcggactgatagagctttggaccataaagattatagaaaca
gaggaaggtacgactgcaacagcagctcttgctctgcgcctcgaaccgttcatgtgtcat
gtctcggctgtgaatcgcttagtttggaaaccaactgagaagtgcgagtctaatcagagc
ttgctaaggttaacttcttgtgcggatgacaattgtgtcagagtttttgacttcaagttt
tga
DBGET
integrated database retrieval system
