Camelina sativa (false flax): 104758298
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Entry
104758298 CDS
T05044
Name
(RefSeq) cell division cycle 20.1, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104758298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104758298
03036 Chromosome and associated proteins [BR:
csat03036
]
104758298
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
104758298
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
104758298
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WDR55
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_SPT8
WDR54
Ge1_WD40
CFAP43_N
Beta-prop_Nup120_160
Beta-prop_RIG_1st
WDR90_beta-prop_4th
Beta-prop_IFT80_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
104758298
NCBI-ProteinID:
XP_010479436
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Position
17:29133392..29136336
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AA seq
440 aa
AA seq
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MKTEYDRFIPNRSAMDFEYAQFQLMEGRRLEEEEAKVIDSSRVAYRKQLAEVLGLNRNRI
LAFRNKRPSPTRRYSSDHHQPKPKPLLKPRRRIPPDPERTLDALDIVDDFYLNLLDWGSA
NLLAIALGNTVYLWDHSTGSVSHLVTVDQDKGPVTSVNWASDGRHLALGLNYGYVQLWDS
VAQVLLRTFKACNGHSRVVSLAWNNHILSTGRFNGRIINNDVRIRSHVVATYKGHTREVC
SLRWSPSGQRLASGGDDNLVHIWDLCSSSQWLHRLRGHTSAVKALSWSPFQSNLLATGGD
ETIKFWNTLTGACLNSVDTASQVSSLLWSTKERELLSSHGNQLTLWNYPSMAKITELSSG
HISRVLCMAQSPDGCTVASVAGDEYLCFWNVFGVPETAKKPAPTRRRVHEPFSHSHMPLI
RDDCYICSDHMESFDVCHWK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggagtacgatagattcatacccaaccgttcggcgatggattttgaatacgcg
cagttccagttaatggaaggaaggaggctggaagaagaagaagccaaggtaattgattca
tctcgggttgcctacagaaagcaattggcagaggttttgggtttgaatcgcaatcgcatc
ctcgccttcaggaacaagcgaccttcaccaactcgtcgctactcctctgaccaccaccaa
cctaaacctaaaccactcctaaagcctcgcagacgcattcctccggatcccgagagaacg
ctggacgcgctggacattgttgatgatttctatctcaacttgcttgactggggcagtgct
aatctcttagccatagctttgggtaacactgtttatctctgggatcattccactggctct
gtttctcatcttgtgactgttgaccaagacaaaggacccgtcacgagtgtgaactgggcc
tctgatggtcgtcacctcgcccttggcctcaactacggctatgtgcagctctgggactcc
gttgcccaagttctactgagaacattcaaagcgtgtaacggccactcgagagtagtgtca
ctggcttggaacaaccacatcctctcaacgggaagattcaatggaaggatcatcaacaac
gatgtgcgtatcagatcacacgtcgtggcaacttacaaaggtcacactcgtgaggtttgt
tctctcaggtggtcaccatctggtcagagactagctagtggtggcgacgacaatttggta
cacatatgggatctttgttccagttcccaatggctgcacaggctcaggggacatacttct
gcggttaaagctctctcctggtctccgttccagagcaatttgcttgcaactggcggtgat
gagacgattaagttctggaacaccctcactggggcttgcttgaattcagtagacactgct
tctcaagtttcttccttgttatggagcaccaaggaaagagagttgcttagctcacatggg
aatcaacttaccctctggaactacccatccatggccaaaataactgagctctcctccggt
catatatcaagagttctttgtatggctcagagtcccgatggttgtaccgtagcttctgta
gcaggtgatgagtatctctgcttctggaatgtttttggagtaccagagaccgccaaaaaa
cctgctccaacaagaagaagagttcatgagccgttttctcactctcacatgcctcttatt
cgggatgattgttacatctgctctgatcatatggaaagctttgatgtgtgtcactggaag
tga
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