KEGG   Camelina sativa (false flax): 104758671
Entry
104758671         CDS       T05044                                 
Name
(RefSeq) UBP1-associated protein 2C-like isoform X2
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
csat  Camelina sativa (false flax)
Pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104758671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104758671
   03041 Spliceosome [BR:csat03041]
    104758671
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104758671
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104758671
Spliceosome [BR:csat03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104758671
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 104758671
NCBI-ProteinID: XP_010479880
UniProt: A0ABM1R6Q3
LinkDB
Position
17:complement(32642703..32647378)
AA seq 424 aa
MDMLKKRKLDENGISMLNEGVIGPVSSRLMPHDARKIIERFSTDQLLDILQEAVVRHPDI
LEIVRSTADSDISQRKLFIRGLAAETTTEGLRSLFSNYGDLEEAIVILDKVTAKSKGYGF
VTFKHVDGALLALKEPSKKIDGRVTVTQLAAAGNQGTTNSHVTDISMRKIYVANVPFDMP
ADRLLNQFLAYGDIEEGPLGFDKITGKSRGFALFVYKTAEGAQAALAEPMKVVDGKNLQC
KLAIDGKKGKPPGQDGGAGVGHGHGHGHGHGHGDGMGMVPPSGPYGAATGGHGGPAGLGA
YGGYSGGAPHHMNSTPSSVGVATAGGYGGAYGGHYSAYGGAGTGAYGGLGAGSMGVSGGG
YGPGSGTGAYRMPPSSMSGGGYPESGHYGHSSASAYPGQHQPVGSSPVPRVSLAGMYPNG
PPNY
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggatatgttgaagaagcgaaagctcgatgagaatggaatctcgatgctaaacgaaggt
gtcatcggccccgtttcgtctcgattgatgccacatgacgctaggaagattatcgagcgg
ttctctactgatcagcttctcgatatcttacaagaagctgttgtacggcatccagatatc
ctcgagatcgttagatcgaccgcagattccgatatctctcagaggaagctattcatccgt
ggactcgcggcggagacgacgacggaaggtcttcgttctcttttctccaattacggagat
ctcgaagaagctatcgtgattctcgataaggttactgctaaatccaaaggttatggtttc
gtgacttttaaacatgttgatggagctctgcttgctttgaaagagccgtctaagaagatt
gatggacgcgttacggttacgcagctcgcggcggctgggaatcaaggtacgacgaactca
catgttacggatatatccatgaggaagatttatgttgcgaatgtgccgtttgatatgccg
gcggataggttattgaatcagtttttggcttatggggatatcgaggaaggtcctttgggt
tttgacaagattactggtaaatcaaggggttttgcgttgtttgtttacaagactgctgaa
ggtgctcaggctgctcttgctgagcctatgaaggtggttgatggtaagaatttgcagtgt
aaattggctattgacggtaagaaaggaaagccaccaggtcaagacggtggtgctggggtt
ggtcatggtcatggtcatggtcacggtcacggtcacggtgatggaatgggtatggttcct
ccttctggaccttatggcgcagctactggtggtcacggtggacctgctgggttgggtgct
tatggtgggtattcaggaggagcaccgcatcacatgaattccacaccatcatcagtgggt
gttgctactgcaggtggctatggaggtgcatatggtggtcattacagtgcatacggtggt
gcaggaactggtgcttatggtggtcttggtgcaggatcaatgggtgtttccggtggtggt
tatgggcctggttctggaactggggcgtatagaatgccacccagttcgatgtctggtggt
ggttatccagagagtgggcactatggacattcatcagcttcagcatatcctggacagcat
cagcctgttggttcctctccggtgccaagagtttctcttgcaggaatgtaccccaatggt
cctccaaattactga

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