Camelina sativa (false flax): 104759057
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Entry
104759057 CDS
T05044
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104759057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104759057
03036 Chromosome and associated proteins [BR:
csat03036
]
104759057
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104759057
Coactivators
SAGA/TFTC/STAGA complex
104759057
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104759057
STAGA complex
104759057
TFTC complex
104759057
SAGA complex
104759057
SLIK complex
104759057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
DUF5827
Motif
Other DBs
NCBI-GeneID:
104759057
NCBI-ProteinID:
XP_010480364
LinkDB
All DBs
Position
1:complement(3884651..3887691)
Genome browser
AA seq
536 aa
AA seq
DB search
MDQSRQSTTASQPPETPPQPSDSASKPSASSQIQQPPSTNPSSSYISSIPSSPTPPPPSL
NPNPNPPQYTRPVTSPATQQQQNIPQPLGRPPPPAYSRPWQQHSSYTHFSSASSPLLSSS
SAPASSSSSSSSLPITGQQRGGMAIGVPASPIPSPSPSPSPSQHSPSAFPGSFGQQYGGL
GRGTVGMSEATSNTSVPQVRMMQGTQGIGMMGTLGSGSQIRPSGMAQHQQRPTQSSLRPA
TSPTTQSPVTQNFQGHSLMRPSPIGSPSVQSTSAAQQSLQAINQPWLSSTPQGKPPLPPP
TYRPQVNSPSMQQRPHLPQQQHLSTSASTSQPQQQQSQQLHQPQEQLQQLRSPQQPLPHP
HQPTRVQGSVNQKVTSPVMPSQPPVAQPGNQVSAENEASDDRILGKRSIHELLQQIDPSE
KLDPEVEDILADIAEDFVESITTFSCSLAKHRKSDTLEAKDILLHVERNWNIRPPGFSSD
EFKTFRKPLTTDIHKERLAAIKKSVTATEAANARNAFGRGGQAKTPANPLASTFNH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtcacggcaaagcacgacggcgtctcagccaccggaaacaccgccccagcca
tcggattcggcttccaaaccatcggcttcatcacagattcaacaacctccttccacgaat
ccaagctcctcctacatttcctcaattccttcttccccaactccaccaccaccgtcgctc
aatccaaaccctaatcctcctcaatacacgcgcccggtgacatctccagcgactcaacag
caacagaacatcccccagcctttggggcgacctcctccgccggcgtactcgagaccatgg
caacaacactcctcttacactcacttctcctccgcttcgtcgccattgttatcttcctca
tcagctccggcctcttcttcttcttcttcgtcatctttacctattactgggcaacaaaga
ggtggcatggcgattggcgttccagcttccccaattccgagtccttctccttctccttca
ccttcccagcattcgccttctgcttttcccggctcttttgggcagcaatacggcggatta
ggtcgtggaactgtcggaatgtcagaagctacgtccaatacaagtgtcccgcaggttagg
atgatgcaaggaactcagggaattgggatgatggggacacttggctcaggttcacaaata
agaccgagtgggatggctcagcaccaacagagaccaactcaatcgtctctaaggccagct
acttccccaactacccagtctcctgttacccaaaactttcaaggacatagccttatgaga
ccttcacccattggttctcctagtgttcaatctactagtgcagcacaacaaagcttgcaa
gccattaatcaaccgtggttatcatctactccccaagggaagccgcctttgccaccccct
acgtatagaccacaagtaaattctccctccatgcaacaaagacctcatcttcctcaacaa
caacatctttccacgtcagcgtcaacttcacagcctcagcaacaacaatctcaacaacta
catcagcctcaagagcagcttcaacaacttagatctccgcagcagcctttacctcaccca
catcagccaacccgggtccaagggtctgtaaatcagaaagttacttctccggtaatgcca
agccagcctccggtggctcaaccaggaaaccaagtttctgcagagaatgaggcatctgat
gatcgtatcctggggaaacgaagtatccatgagttacttcagcagattgatccgtcagag
aaattggaccctgaggttgaagacatccttgctgatattgctgaagattttgtagagtca
atcacaacttttagttgttctttagccaaacatagaaagtcagatactctagaggctaag
gacatcctgctccatgttgaaagaaactggaatatcaggcctcctggttttagcagtgat
gagttcaagacatttcgaaagccactgacaacagatattcacaaagagcgacttgccgct
ataaagaagtctgtcacagcaacggaagcagcaaacgccaggaatgcgttcgggagaggc
ggtcaggcaaagacacctgctaatcccttggcttcaactttcaatcactga
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