Camelina sativa (false flax): 104759100
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Entry
104759100 CDS
T05044
Name
(RefSeq) prolycopene isomerase, chloroplastic-like
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00906
Carotenoid biosynthesis
csat01100
Metabolic pathways
csat01110
Biosynthesis of secondary metabolites
Module
csat_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
104759100
Enzymes [BR:
csat01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
104759100
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
Thi4
HI0933_like
GDI
GIDA
Pyr_redox_2
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
104759100
NCBI-ProteinID:
XP_010480371
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Position
17:complement(2724544..2727870)
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AA seq
507 aa
AA seq
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MNLSFQNPIECGHPSSLFFSPLKTSNKLGCSSNLGFHVRFFENRKKKSPMVTVKSVSSSS
IAVEGTKKRDATSTRESVYDAIVIGSGIGGLVAATQLAVKEAKVLVLEKYLIPGGSSGYY
ERDGYTFDVGSSVMFGFSDKGNLNLITQALKAVGRKMEVIPDPTTVHFHLPNDLSVRIHR
EYDDFVTELTSKFPHEKEGILGFYGDCWKIFNSLNSLELKSLEEPIYLFGQFFQKPLECL
TLAYYLPQNAGAIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHYGGIN
YPVGGVGGIAKSLAEGLVDQGSEILYKANVKSIILDDGKAVGVRLADGREFFAKTIISNA
TRWDTFGKLLKGEKLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWK
NLEEPYGSIFLSIPTILDPSLAPDGRHILHIFTTSSIEDWEGLPPKEYEAKKEEVAAEII
QRLEKKLFPGLSSSITFKEVRLFFPPT
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgagttttcaaaatcccatagagtgtggtcatcctagttccttgttcttctct
ccgttaaagacctcgaataagctgggttgttcttccaatttagggtttcatgttcgattt
tttgagaatcggaagaagaaatcgcctatggttacagtaaaatccgtttcttcttcttca
attgcggttgaagggacgaagaagagagacgcaacaagtacaagagagagtgtgtacgac
gccatagtaatcggctctgggattggaggattagtcgctgccactcagctagctgttaaa
gaagctaaggttttagttctggagaagtatttgattcctggtgggagctctggctattac
gaaagagatgggtatacatttgatgttggctcttctgtcatgtttggtttcagcgataag
gggaaccttaacttgataactcaggcgttgaaggctgttggccgtaagatggaggttata
cctgatcctactactgtccatttccatcttccgaatgatctttctgttcggattcataga
gaatacgatgatttcgtcactgaacttaccagcaagtttccccatgaaaaggaagggatc
cttggtttctatggcgactgctggaagatctttaactcattgaactccctggagttaaag
tcactagaagagcctatctacctttttggacagttctttcagaaaccgcttgaatgcttg
acactcgcttattacttgccgcagaatgctggggctatagctcggaagtacataaaggat
cctcaattattatctttcattgatgcagagtgtttcattgtgagtacagtcaatgctcta
cagacgccaatgatcaatgcaagtatggttttatgtgacaggcactatggaggaattaac
tacccggttggtggcgttggtgggattgcaaagtctttagcagaaggacttgttgatcag
ggcagtgaaattctctacaaggctaatgtaaaaagcataatacttgatgatggaaaagct
gtcggtgttaggctagcagatggaagagaatttttcgccaaaacaataatttcaaatgct
acaagatgggatacgtttgggaaacttttaaaaggagaaaagcttccaaaagaagaagaa
aatttccagaaagtctatgtcaaggctccatcatttctttcaatccacatgggtgttaaa
gcagaggttctccctccagatacagattgccatcattttgtgcttgaggacgattggaag
aatctggaggagccttatggtagtattttcctcagcattccaaccattcttgatccatct
ttggctccagatggtcgacatatacttcacatatttacaacttcctcaattgaggattgg
gagggactccctccaaaagagtatgaagcgaaaaaggaagaagtggcagctgaaataata
cagaggctagagaaaaaactgtttccagggctcagttcatctattacgtttaaggaggtt
aggctctttttcccccctacg
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