Camelina sativa (false flax): 104759123
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Entry
104759123 CDS
T05044
Name
(RefSeq) small RNA degrading nuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104759123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104759123
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
RNases
104759123
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
IFT57
Motif
Other DBs
NCBI-GeneID:
104759123
NCBI-ProteinID:
XP_010480393
LinkDB
All DBs
Position
17:3659437..3661164
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AA seq
575 aa
AA seq
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MSSWKRKRDAEDVRESGDGRDNEKSNTGNSFFDIYGPEAKAELDFKSPETTTLNLQDVQG
LVTWVLAEEEGYMPKPSWVFIKKKPLIPKVVMLYLPGLDAALYLSQSKALASLQSCCGNP
ITLLGLSSEVDDMRTIDTILTCKVKKKKTVLTSSVEPPPPLVSSPEACNLFPVAYYTLSP
KELEQNGYTFEQFDQLTPTLAAPPGSSHHEIVALDCQMCITKEGLELTRVTLVDIQGQVL
LDKLVMPTNPITDYNTRYSGITAMMMEGVTTTLEDIQQEFLKLVFKETILVGHSLENDLF
SLKISHNLVIDTAVLYKHPHGPSYKTKRRILAEKFLAREIQLSESGYDSVEDAKAAMDLA
LLKIKHGPDFGSSQPEVRRRNLLAILSESGKSTCMIDNINIVKRYACESSSSNSIPVSSD
DEALSKAMEEVKNKRSQFVWTQFSELNTHFQSTQKQNFRIAEMISLLTCNNNTSLKEKNN
VSLETKEILKKMNERVQSLYDALPNNAMFIVCTGHGDTSFVDRVRKMLKDENGIGFDREK
VVKFLDELQAQAEVALCFVGIKAVDLVDQSCSRNR
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttggaagcggaagcgcgacgcagaagatgttagagaaagtggcgacggtagg
gataatgaaaagagcaataccggaaacagcttcttcgatatatatggacccgaagcgaaa
gcagaactcgatttcaagagccctgaaacaacaacattgaacttacaagatgttcaggga
cttgtgacatgggttcttgcagaagaagaaggttatatgccaaagccctcgtgggtgttt
attaagaagaagcctctcattccaaaggttgtaatgctttaccttccagggttggacgca
gctttatacttatcacagtctaaagcacttgctagtttgcaatcgtgttgtggcaatcct
ataacacttttaggtttgagctctgaagttgatgacatgaggactattgatacaatcctt
acttgcaaggttaaaaaaaagaaaactgtacttacgagttcagtggaaccaccacctccc
cttgtatctagcccagaagcatgcaatctgttccctgttgcatactatactctaagtcca
aaggaactggaacaaaatggatacacttttgaacaatttgatcagcttacccctacactt
gctgcaccaccaggatcatctcaccatgaaattgtggctcttgattgccagatgtgtatt
acaaaggagggtttggagttaacaagagtgacactggtcgatatccaaggacaggttcta
ctagataaattagtcatgccaacaaatcctatcactgattataacacaaggtatagtgga
ataacagctatgatgatggaaggagttacaacgactcttgaagatatccagcaagagttc
ttaaagctggttttcaaagagaccatattagtcggacactcgttggaaaatgacttgttt
tctttgaagatctctcataatctggtgattgacactgccgtactatacaagcatccacat
ggtccatcttataaaactaaacgtcgaattctagcagaaaagtttcttgctagagagata
cagctgtctgaatctggatatgacagcgtagaggatgcaaaagcagccatggatttggca
ctattgaagataaaacatggacctgattttggctcctcacaaccggaagtgagaagaaga
aacctactcgccattttgagcgagagcgggaaatctacttgtatgattgacaatatcaac
attgtgaagcgatatgcttgtgagtcatcatcatccaattcaattccagtttcttctgac
gacgaagcactttcaaaggccatggaggaggtaaagaacaagcggtcacagttcgtttgg
acacagttctcagaattgaatacacatttccagagcacgcagaaacaaaatttcagaata
gcggagatgatctcattgcttacatgtaacaacaacacgagcctcaaggaaaaaaacaat
gtttcacttgaaaccaaggaaatcttaaagaaaatgaacgagagagtccaatccctttac
gacgcattaccgaacaatgcgatgtttatagtttgcaccggacacggagacacatccttt
gtagacagagtgaggaaaatgcttaaagatgagaatggcatcgggtttgaccgtgagaaa
gttgtcaagtttcttgatgagcttcaagcacaagccgaagtagctctctgttttgttggt
atcaaagcagtcgatctagtggatcaaagctgttctagaaatcgctaa
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