Camelina sativa (false flax): 104759148
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Entry
104759148 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104759148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104759148
03036 Chromosome and associated proteins [BR:
csat03036
]
104759148
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104759148
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104759148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
104759148
NCBI-ProteinID:
XP_019094384
LinkDB
All DBs
Position
17:complement(4367963..4373249)
Genome browser
AA seq
971 aa
AA seq
DB search
MFGSSNPFGQSSGSSPFASQSLFGQTSNSSSNNPFAPATQFGTSTPFGAQTGSSIFGSTS
TGVFGAPQASSPFASTPTFGASSSPAFGNSTPAFGASPASSPFGGSSGFGQKPLGFSTPQ
SNPFGSTMQQSQPAFGNSTFGSSTPFGATNTPAFGASSTPSFGATNTPSFGASSTPAFGA
TSTPAFGASNSPSFGVTNTPAFGASPTPAFGSTGTTFGNTGFGSGGAFGASSTPAFGASS
TPAFGASGTPAFGASSTPAFGASSTPAFGASSTPAFGASSTPSFGASNTSSFSFGSSPAF
SQSTAAFGSSAFGSTPSPFGGAQASTPNFGGSGFGQSPFGGQQGGSRAVPYAPTVEAEAG
SGTQPAGKLESISAMPAYKDKNHEELRWEDYQRGDKGGPLPAGQSPGNAGFGISTAQANP
FSPSPAFGQTSANPTNPFSSSTSTNPFAPQTPTIASSGFGTATSNFGSSPFGVTSSSNLF
GSTSSATTSVFGSSSAFGTTTSSPLFGSSSNPGFGSSPSIFGSASGQGATSAFGNSQPST
LFSSTPSAGQTGSAFGQTGSAFGNFGQSSAPAFGQNSLFNKPSTGFGNMFSSSSTLTTSS
SSPFGQTMTAGMTPFQSAQPGQASNGFGFNTFNQTQAANTAGNAGGLGFFGQGNFGQSYG
LFDITICKTSASALFVPFFTDDEESSSTPKADALFIPRENPRALVIRPVQQWPSRDKSTL
PKARPTAPVHENGRGPDMATDAINHEKNGNGELGATEERQHPSVNANQKQNGTTCSDQTS
EKDRPYKTLNGHRAGEAAIVYEHGAEIEALMPKLRHSDYFTEPRIQELAAKERANPGYCR
RVRDFVVGRHGFGSIKFMGETDVRRLDLESLVQFNNREVIVYMDESKKPAVGQGLNKPAE
VTLLNIKCVDKKTGKQFTEGERVEKYKMMLKKKAEAQGAEFVSFDPVKGEWKFRVEHFSS
YKLGEEDDSEV
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctcatccaatccttttggacagtcatctggtagcagcccatttgcgtcccaa
tctttatttggtcagaccagcaattcaagtagtaacaatccctttgctccagcaacacag
tttggtacgtctactccttttggtgcacagacgggaagttcaatatttggaagcacttca
accggtgtttttggtgcacctcaagcatcctctcccttcgcctccaccccaacttttgga
gcttcttcatcaccagcatttgggaattctactccggcctttggagcatctccagcatct
tcaccttttggtggatcttctggttttgggcagaaacctttgggattttcaacgccccag
tcaaatccttttggaagcacgatgcagcaatcccaacctgcatttggaaacagtactttt
ggttcatctacaccttttggtgccacaaacacacctgcctttggcgcatcaagcacgcct
tccttcggtgccacaaacacaccctcgtttggtgcatcgagcacgcctgcctttggtgcc
acaagcacgcctgcctttggcgcctcaaactctccctcctttggcgtcacaaacacacct
gcatttggcgcgtcaccgactccagcttttggtagcactggcaccacgtttggcaacact
ggctttggttctggaggtgcttttggagcatcaagcacccctgcttttggagcttcaagc
acccctgcttttggtgcatcaggcactcctgcatttggtgcatcaagtacacctgccttt
ggggcatctagtacacctgcctttggggcatccagtacacctgcctttggggcatccagt
acaccttcttttggggcatcaaatacctcatcctttagttttggctcctcgccagccttt
agccagtctacagccgcgtttggtagcagcgcttttggctctacaccatctccttttgga
ggtgcgcaggcttcaaccccaaattttgggggttctggttttggtcaatcacctttcggt
ggtcaacaagggggtagtcgagccgtgccttatgcaccgacagttgaggcagaggcaggg
agcggtacgcagcctgctggaaagttggaatctatttctgccatgccagcatacaaagat
aaaaaccatgaggagcttaggtgggaagattaccaacgaggagataaaggtggaccactt
cctgctggccagtctcctggaaatgccggatttggtatatcaactgctcaggcaaatcct
ttttctccatcaccggcatttggtcagacatcagcaaatccaacaaaccctttttcgagc
tcaacatctacaaacccttttgcccctcaaaccccaacaattgccagttcgggttttgga
acggctacctcaaattttggttcctcgcccttcggtgtaacatcttcttccaatcttttt
gggtcaacttcgtcagctaccacatccgtttttggatcatcgtccgcttttggaacaaca
acatcatcaccgttatttggttcatcaagcaatccgggatttggctcttctccgtcaatc
tttggttcggcttctggtcagggggcaacttcggcgtttggaaacagtcagccatctact
ctattcagttcaaccccctcggccgggcagactggttctgcgtttggacagactggttct
gcttttggaaacttcggacagagtagtgctcctgcatttggtcaaaatagtcttttcaat
aaaccctccactggatttggaaacatgttttcaagttcttctacattaactacgtctagc
agctctccatttggacaaacaatgactgctggtatgacaccctttcaatcagctcagcca
ggtcaagcatcaaatggttttggtttcaacaccttcaatcaaacgcaagcagctaataca
gctggaaatgctggtggactgggattttttggtcaaggcaacttcgggcaatcgtatggt
ctttttgacatcactatttgcaagacttctgcttccgctctttttgttccatttttcact
gatgacgaggaaagctcaagtactccaaaggcagatgctcttttcattccaagggagaac
cctagagctctagttatacgcccagttcaacagtggccttcaagggacaaatcaacactt
ccaaaggctcgcccgacggctccagtacatgaaaatgggaggggtccagacatggctact
gatgcaataaaccatgagaaaaatggtaacggagaacttggtgcaactgaagaaagacag
catccatcagttaatgcaaatcagaaacagaatggcacaacatgctcagatcagaccagc
gagaaagaccgtccctacaaaactctaaatggacacagagcaggagaagctgcgattgtt
tatgagcatggtgcggaaatcgaggctctaatgccgaagctacgccattctgattatttc
accgagccacgtattcaggaactcgcagctaaggaaagagcaaatccaggttattgcagg
cgggttagagactttgtggttggaaggcacggttttggtagcataaagttcatgggagag
acagatgttcgcaggctagacttggaatcgctggttcagttcaataatagggaagtgatt
gtatacatggacgagagcaagaaaccggcagttgggcagggtctgaataaaccggctgag
gtaaccttgctgaatataaaatgtgttgataagaagacaggaaaacagtttactgaagga
gagagagtggagaagtataagatgatgcttaagaagaaagctgaggcacaaggagctgag
tttgtgtcgtttgatcctgtgaaaggcgagtggaagtttcgagtcgagcattttagttcc
tataagctgggcgaggaagacgacagtgaagtataa
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