Camelina sativa (false flax): 104759251
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Entry
104759251 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104759251
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104759251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104759251
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104759251
mRNA degradation factors
5'-3' decay
Decapping complex
104759251
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
104759251
NCBI-ProteinID:
XP_019094412
UniProt:
A0ABM1R5X4
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Position
17
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AA seq
714 aa
AA seq
DB search
MNGLGCGSSIEQASQSMDLKQIGDNSTGVFDASQYAFFGNHVVEEVELGGLEDEEEDLPL
PGLEDDFAFDKEEAEVSRTLFDADDLASTFSKLNRTPEKYRSTVPVAGNGSRQNYVGNGW
NHREELPNWYNLQSSDSEAIQDDIRWPFPTPNLVEQRNLHRATSYPEPQHQQPPYQHQQQ
FSSEPILVPDQHVGPHMGSPFPSSHPQLVGMHHESPQLTGNMPQLRPSLLVNNRPSTQWM
NRQNMFPGDSSGIMNNMLPQQQLSHQNGLMPQQQKIPKMQVPQSRLPHPLQPHRHFPGMH
PQPFNSHLSRSASSGSYDAMLGMQLVATHSNDPYVDDYYHQGRLAKKSAGAKLKHHFCPN
HLRDLPSRARSNNEPHAYLQVDALGRVPFSSIRRPRPLLEMDPPNSAKSGNLDQKDTDKP
LEQEPMLAARVIIEEGLYLFLEVDDIDRFLEFNQLPDGGNQLRQKRQALLDGLAVSLQLV
DPLGKNGQNSGLASQDLVFLRITSLRKGRKLLTRYLQLLYPGSDLMRIVCMAIFRHLRSL
FGVRSSDAETTKTTIKLGKVVALCIHTMDLGPVSACLAAVSCSSEHPPLRPLGSPVGDES
TIILKTALDRASELLSANNYNNAGMNLWRASFDEFFNLLMKHCISKYDSIMQNLNSQFLP
HFATEMSDAAAQAIVREMPIELLRASFPHISDEQKRILMEFLKPGSQKIESVIA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtcttggctgtgggagtagtatcgaacaagcttcccaatccatggatcttaag
cagattggagataattctacaggtgtctttgatgcatctcagtatgctttttttggtaac
catgttgttgaggaggttgagctgggtggattggaagacgaagaagaggatttacccttg
cctggattagaagatgattttgcctttgataaggaagaggctgaagtttctagaactctt
tttgacgctgatgatcttgctagtacattttcaaagttgaataggactcctgaaaaatat
aggagcacggtacccgtagctggtaacggttcaagacagaattatgttggtaatgggtgg
aaccatagggaggagttgccaaattggtataacctgcaaagttcagactctgaggccatc
caagatgacataaggtggccttttcctactccaaatcttgttgagcaaagaaacctgcat
agagcaacatcatatcctgaaccacagcatcaacagcccccataccagcatcaacaacaa
ttttccagcgaaccgattcttgtgccagatcagcatgtaggccctcatatgggatcgcca
tttccaagttctcatcctcagttggttggcatgcatcatgaatcaccgcaactcactgga
aacatgcctcaactgcgaccttctcttctcgtgaacaatcgcccctccactcagtggatg
aatcgccaaaatatgtttcctggggacagttctgggatcatgaacaatatgttaccacaa
cagcagttatctcatcaaaacgggttgatgccgcaacagcagaagatacctaagatgcag
gttcctcagagtaggttaccacatccgctgcagcctcacaggcattttccaggaatgcac
cctcaaccatttaattcccacctttctcgatcagcgtcctcgggcagttatgatgcaatg
cttggaatgcagcttgtagctacacatagcaatgatccttatgtagatgattattaccac
caggggcgtcttgctaagaaatctgctggcgccaaactgaagcaccatttctgtccgaat
catttaagagaccttccatctcgcgcacgttctaacaatgagccccatgcatatcttcag
gttgatgctcttggtagagttcctttctcttcgatccgcaggcctcgacctttgcttgaa
atggatcctccaaattcagctaaatctggtaatctggaccagaaagatacagacaagccc
cttgaacaagaaccaatgcttgcagccagggtgattattgaagaaggtctctacctcttc
ctcgaggtagatgatattgaccggttcttagagttcaatcaactcccggatggtggaaac
cagttgaggcaaaagcggcaagctctgttggatgggcttgcagtgtcactgcagcttgtt
gacccacttggtaaaaacgggcaaaacagtgggcttgcatctcaggatcttgtctttcta
aggatcacctcccttcgaaagggtcggaagctacttacaaggtacctccagcttctttac
cccggcagtgatctaatgcgaatcgtctgcatggctatttttagacacttaaggtctttg
tttggagtgagatcatcagatgccgaaaccacaaaaacaacaatcaaacttggaaaagtt
gtcgcgttatgcattcacaccatggatcttggacccgtaagcgcttgtctagcagcagtt
tcttgttcttccgagcacccaccacttcgtcctttgggtagccctgttggagacgaatct
actattatactgaaaactgcactcgatagagcttccgagctcctcagtgctaacaattac
aacaacgcaggcatgaatctgtggcgtgcttcctttgatgagttctttaacttactgatg
aaacactgcataagcaagtacgacagtataatgcagaacctgaattcgcaattcttacca
cactttgccacagagatgtctgacgctgctgcacaagctattgtcagggaaatgcctatc
gagcttctacgtgcaagtttcccgcacattagtgatgagcaaaagagaatacttatggaa
ttcttgaagcctggtagccagaaaattgaatcagttatagcttga
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