Camelina sativa (false flax): 104760123
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Entry
104760123 CDS
T05044
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104760123
03400 DNA repair and recombination proteins [BR:
csat03400
]
104760123
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
104760123
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
104760123
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
Rad9_Rad53_bind
Cnd1
LBR_tudor
Motif
Other DBs
NCBI-GeneID:
104760123
NCBI-ProteinID:
XP_019095474
UniProt:
A0ABM1R8Y6
LinkDB
All DBs
Position
18:complement(276072..291078)
Genome browser
AA seq
1543 aa
AA seq
DB search
MAQKPAEQLNEFGSKLDLTPVSKDSLLKLLKESAVCLSELEQSPPPAVLKSIQPFLDAVI
KPEILNHQDKDVKLLVASCISEITRITAPEAPYSDNIMMDIFQLIVTAFTGLNDVSGPSF
GRRVVILETVAKYRSCVMMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMILLLE
ESEDVQEHLLLILLSKLGRNRSDVTDAARRLAMKVIEQCAPKVESDIKQFLISSMSGDSR
FSSSQIDYHEVIYDLYRCAPQALSGVAPYLTGELLADKLDTRLKVVGLVGDLFSLPGRVI
SEEFGSIFSEFLKRLTDRVVEVRMAILDHIKNCLLSDPLRAEASQIICALCDRLLDYDEN
IHVLNYSMCCRSDTIEYILCSSLFPSGFSVRDKGKHWIQIFSGFDKVETKAFEKILEQKQ
RIQQEMQRYLSIKQTQQSADAPDVQKKILFGFRVMSRAFSDPPKTEQNFLILDQLKDANI
WKILTNLLDPNTSIMQASRIRDDMLKILSEKHSLYEFLSTLSIKCSYLLFSKEYVKEILA
EVSARKSSKHVLGIQSCMDFLGLLASFCPSLFDGAEEELISFLKDDDEMIKEGTLKILAK
AGGTIRENLIVVASSVDLLLERICVEGNRKQAKYAVHALASITKDDGLKSLSVLYKRLVD
MLEDKRHQPAVLQCLGCIAQIAMPVYETRESEVVEFIRSKILKLQSETVDDKKLSWDDKS
EICQLKIYGIKTLVKSYLPLKDAHLRAGVDDLLGLLKNILSFGEVSEDLESSSVDKAHLK
LAAGKAVLRLSRHWDDRIPIEIFHLTLKTPEIPFPTAKKIFLGKIHQYVKDRVLETKYAC
SFLFDITGSSVLESEEEKHNLADIIQHSYQTKVRKISSQTDANSVTLHPHHILPYLVHAL
AHHSCPDVENCKDVKEYEMIYRQLYLIISMLLHKEEDGKAEDIDKEQEFHTIIFILHSIK
QSEDVTDATKSKNSHAICELGLSIINHLTQKDPDLQGAITPVPLPATLYKLPEKVEGDKS
EVGEEKLWLADETVLAHFRDLKLESHADASVIPQTSEEEVMIDGESDGNEIPLGKIVERL
RAQGTKIRKGKKSKSVPAEDENGKNDVDVLKMVREINLDHLQMLNKFESSNGHKHSTGDA
TSVVSVPKRRRSSSGHSPFKFSNSGPKVPLKASEEELHQERDMDTNVSLDSHDENSDQEK
ILESISPRKRKKSLSSKLKITESDWALTDLDIQSEGGNYSERSRSAESGDSKLKSASGSM
KKRKRKNMSGLAKCSTNESKLANDELIGCRIEVWWPMDKRFYEGTIKSYDSTKQRHVILY
EDGDVEVLNLDKERWELIDTGGKPAKKSRTSKGSSNKKRSFESKSKNSDGLQRDEDPITT
TPKGKRTPKRNLKHADPKGKPRSLSLEHEKLESRNKKRRSSATPVGEVAGKKKGKKMNTG
SEAGIEYSGDAGEEKSESEGKSLKEGEDDEEVVNKEEDLQDAKTESSGDAEGKEAEHDNS
DTEGKQENNEMETEAEDDAETSDNETLGAWKSKVGKSSSRKAT
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaagccggcggaacagttgaatgagttcggatcgaaacttgacctaactcct
gtttcgaaagattcgttgctcaaactcttaaaggaatctgctgtttgtctttctgagttg
gagcagtctccaccacctgcagtgctcaagtccattcagcctttccttgatgcagttatt
aaacctgaaattctcaaccatcaagacaaggatgtcaagcttctggttgcaagctgcatt
tctgagattactcgtatcacagcacctgaagcgccttacagtgataatattatgatggat
atttttcaactgattgtgactgcttttactgggttgaatgatgtcagtggtccatcattt
ggaaggagggttgtcattttagaaacggttgcaaagtacaggtcatgtgttatgatgttg
gatcttgaatgtgatgatctggtgaaagaagtgtttactacatttcttgatgttgctaga
gatgaccatccagagattgttttctcatcaatgcaaaacattatgattcttcttttagaa
gaaagtgaagatgtgcaggagcatcttttactaattttactctctaaattgggccggaat
agaagtgacgttacagatgctgcaagaagacttgctatgaaagtcatagagcagtgtgcc
cccaaagttgaatctgacataaagcagttcctaatctcttcaatgtctggagatagccga
ttttccagcagtcaaattgactaccatgaggttatctatgatttgtaccgctgtgctcct
caggccctatccggagttgcgccgtatctcactggagagcttttggctgataaactggat
actcgtttgaaagtggttggattggttggagacttgttttccttgcctggacgtgtcatt
tccgaagagttcggttccattttttcggagtttctaaaaaggctgaccgatagggttgtt
gaagttaggatggccatccttgaccatattaagaactgtttgctctcggatcctttgaga
gccgaggcttctcaaattatatgtgctctctgtgaccggctgttggattatgatgaaaac
atccatgttctaaattattctatgtgttgcagatcagatacgatcgaatatattctatgc
agttcactgtttcctagtggtttctctgtaagagataaaggtaagcattggatacaaatc
ttttctgggtttgacaaagtggagaccaaagcatttgagaaaatactggagcaaaaacaa
aggatacaacaagaaatgcaaagatatttgtcaatcaagcagacccaacagagtgctgat
gctcctgatgttcagaaaaaaatcctatttggattcagagttatgtcacgtgcattttcc
gaccccccaaagactgagcaaaactttttaattcttgatcaactgaaagatgctaatatc
tggaaaattttgaccaatctgcttgatcccaacactagcataatgcaagcgtccaggatt
cgagatgatatgcttaagatactctctgagaagcattctctctatgaattcctcagcact
ctctctataaagtgttcttatctgctattcagcaaggaatatgtgaaagagatattagcg
gaagtatctgctagaaagtcttctaaacatgtattggggatccaatcttgcatggacttc
ttagggctcctggcatctttctgtccatcattgtttgatggtgctgaagaagaactgata
agtttccttaaagatgatgatgaaatgataaaggagggtactctaaaaattctggcaaaa
gcaggtggtactattcgggagaatctcattgttgtagcaagttctgtggaccttttactg
gagaggatatgtgtagaaggaaaccgcaagcaggctaagtatgctgtgcacgcactagca
tcaataacaaaggatgatggcctgaagtcgctctccgttctgtacaagagactcgtggac
atgctggaggacaagagacatcagccagctgttcttcagtgtcttggatgcatcgcgcag
attgcgatgccagtctatgagactagagaaagcgaagtagttgagtttattagaagcaaa
attttgaagctccaaagtgaaactgtagatgataaaaaattatcatgggatgacaaaagt
gaaatttgtcaactgaagatttatgggatcaagacgttggttaagagctacttgcctctt
aaggatgctcatcttcgtgcgggtgttgatgaccttcttggattactaaaaaacattctt
tcctttggggaagtatctgaggatttagaatcaagttctgttgacaaggcccatttgaaa
cttgctgctggaaaggcagtcctccgcctttctagacattgggacgataggatacctata
gagatctttcatttaactttaaaaacccctgagataccatttcctacagctaagaaaata
ttcctcgggaaaattcatcagtatgtaaaggatcgggttttggagacaaagtatgcctgt
tcattcctttttgatatcactggatcaagtgttctcgaatcagaagaggagaaacacaac
ctagctgatatcatacagcattcttatcaaacaaaagtgcggaaaatttcttctcagact
gatgcaaattcagttactctccaccctcatcatatccttccttatctggttcacgcactt
gcacatcattcttgtcctgatgttgagaattgcaaagacgtgaaggaatatgaaatgata
tatcgccaattatacttgatcatttctatgttgctccataaagaggaagacgggaaggct
gaagatattgacaaggaacaggagtttcacaccattatttttatcttacatagtataaaa
cagtcagaagatgtcactgatgcaacaaagtcgaagaactcacatgcgatctgtgagctt
gggctgtcaataatcaatcacttaactcagaaagatcctgatctacaaggggcgatcaca
cctgtaccactgcctgcgacgctttacaaacttccggaaaaggttgaaggtgacaagtct
gaggtaggtgaggagaaattgtggctagctgatgagactgtcctggcacacttcagagat
ctcaagttggagagtcatgctgatgcatctgtgataccccaaacttcagaagaggaggtt
atgattgatggggaaagtgatgggaatgaaattcctctgggtaaaattgtagagcgtttg
agagctcagggaaccaagattagaaagggcaaaaagagtaaatctgtaccagctgaagat
gaaaatggtaaaaatgatgtcgatgttttgaaaatggtgagagagataaatctcgatcac
ttgcaaatgctgaataaatttgaatccagtaatgggcacaaacattccactggtgatgca
acatcagtagtttcagtccctaagcgccggagatcatcttctggccatagtcctttcaag
ttctcaaatagtggtcctaaagttccactgaaagcttctgaggaagagttgcatcaagag
agagacatggacacaaatgtctctttggactcgcacgacgagaattcagaccaagagaaa
atattagaaagcatctctccccgaaagagaaagaagagcttatcgtcgaaattaaaaatt
acagaatctgattgggctctcacagatctcgacattcaaagcgaaggtggcaactacagt
gagaggagtaggtctgcagaaagtggtgatagcaaattgaagtctgcctctggatcaatg
aagaagcgcaaaagaaaaaacatgtcaggactggctaagtgctctacaaacgaaagtaaa
ttggcaaatgacgaactgattggttgcagaatagaagtatggtggcctatggataaacgg
ttttatgaagggacaattaaatcttatgattccacaaaacagagacatgtgatactttac
gaggatggagatgttgaagtacttaacctagataaagaacggtgggagctcatagacacc
ggtggaaagcccgcaaagaagtccagaacatcaaagggaagttctaataagaaaagatct
tttgaaagtaagtctaagaattcggatgggctacagagggatgaagacccaattaccact
acgccaaaagggaaaagaactccaaagagaaacctaaaacatgccgacccaaaaggcaaa
ccaagaagtctctctttagaacatgagaaattagagagcagaaataagaaaagacgctct
tcagccacgccagtaggtgaagttgctggtaagaaaaaaggaaaaaaaatgaatacgggt
tcagaagcagggatagaatatagtggggatgctggcgaagagaaatcagagtctgaagga
aagtcattgaaagaaggcgaggatgatgaggaagttgtaaacaaggaagaagatttacag
gatgcaaaaacagaatcaagtggggacgctgaggggaaagaagctgaacatgacaactca
gatactgaagggaaacaagaaaacaatgaaatggagactgaagctgaagacgatgctgag
acttctgacaatgagactcttggagcgtggaaaagtaaagtgggtaagtcgagctcgagg
aaagcaacataa
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integrated database retrieval system
