Camelina sativa (false flax): 104760130
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Entry
104760130 CDS
T05044
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104760130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104760130
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104760130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
Sec3_C_2
Motif
Other DBs
NCBI-GeneID:
104760130
NCBI-ProteinID:
XP_010481301
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All DBs
Position
18:310671..312941
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AA seq
429 aa
AA seq
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MEMESCKLFIGGISWETSEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFVVFAHPNVA
ERVVLLRHIIDGKIVEAKKAVPRDDHAVMNKSNSSLQGSPGPSNTKKIFVGGLASSVTEA
EFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKL
AVPKDMALNTMRNQLNVNSFGSSRISSLLNEYTQGFSPSPISGYGVKPEVRYSPAVGNRG
GFSPFGHGYGIELNFDQTQNYGSGSSGGFGRPFSPGYAASLNRYGNQMESGGASVGNGSV
LNAATKNHLWGNGGLGYMSNSPISRSSFNGNSGMPSLGSIGDNWGAAARARSGYHGERGG
VGLEAMREVHVGGYSSGSSSLEADSLYSDSMWLSLPAKSEEGLGMGALDFMSRGPAGYIN
RQPNGGIAA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaatcatgtaagctcttcatcggtgggatatcttgggaaaccagcgaagat
cgtcttcgtgagtattttcagagttttggtgaggttttagaggctgtcatcatgaaagat
cgagccactggtcgtgctcgtggctttggtttcgttgtctttgctcatcccaatgttgct
gagagagtcgttttgcttagacatattatcgatggcaaaattgttgaggctaagaaggca
gttccaagagatgatcacgcagtcatgaacaaaagtaacagcagccttcagggatcacct
ggcccatctaacaccaagaagatctttgtggggggtttggcatcctcggtgacagaggct
gagttcaaaaagtattttgctcagtttggtatgatcactgatgttgtggtgatgtatgac
cacagaactcagcgacctagaggctttgggttcatctcgtatgactctgaggaagctgtc
gacaaagtgctccagaagacattccacgaactcaatggtaagatggtggaggtcaaactg
gctgttcctaaggatatggctctcaacacaatgcggaaccaactgaatgtaaatagcttt
ggcagtagtagaatcagctcgttactgaatgagtacacccaagggttcagcccgagtcca
atctctggttatggagtaaaacctgaagttaggtacagtccagcagtaggtaatagggga
ggattctcaccgtttggacatggatatggaatcgagctcaattttgaccagactcagaac
tatggatctggttctagcggaggctttggtcgacccttcagccctggatatgctgcgagt
ctcaacaggtacggtaaccagatggagtcgggaggagctagtgtcgggaatggttctgtg
ctaaatgcagcaacaaagaaccatttgtggggaaatggtggtcttggttacatgtcaaac
tcgccgatatcaagaagcagctttaatggaaactctggaatgccttcactaggcagcatc
ggagacaactggggagcagctgcacgtgcacgtagtggctaccacggtgagagaggaggc
gtaggattagaagcaatgagagaagttcatgttggtggttacagcagcggctcaagtagc
ttggaggcagactctctgtacagcgactcaatgtggctttcactgcctgcgaagtcagag
gaaggattggggatgggagcattggacttcatgtctagaggaccagctggatacatcaac
aggcaaccaaacggaggcattgcagcttag
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