Camelina sativa (false flax): 104760210
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Entry
104760210 CDS
T05044
Name
(RefSeq) homeobox-leucine zipper protein HDG5
KO
K09338
homeobox-leucine zipper protein
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104760210
Transcription factors [BR:
csat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
104760210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
HTH_Tnp_1
CCPG1_N
Motif
Other DBs
NCBI-GeneID:
104760210
NCBI-ProteinID:
XP_010481400
UniProt:
A0ABM0X6B4
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Position
18
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AA seq
822 aa
AA seq
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MLSIGEGNVMTSDNIRFASQQPSSSSPGTIQNPNFNFIPFNSFSSIIPXXXXXMMSMMMM
MGDGTVEEMMENGSAGGSFGSGSEQAEDPKFGNESDVNELQDDEQPPPAKKKRYHRHTNR
QIQEMEALFKENPHPDDKQRKRLSAELGLKPRQVKFWFQNRRTQMKAQQDRTENAMLRAE
NANLKSENCHLQGELRCLSCPSCGGPTVLGDIPFNELHIENCRLREELDRICCITSRYTG
RPMQSMPSSQPLIDPSSTLPHHQPSLELDMSVYAGNFPEHSCADMMMLPPQDTTCFFPDQ
TVNNNMLLAEEEKVIAMEIAVSCVQELTKMCDTEEPLWIKKKSDKIGGEILCLNEEEYMK
LFPWPVENHNNKADFAREASKANSVVIMNSITLVDAFLNADKWSEMFCSIVARAKTVQII
SSGVSGASGSLLLMYAEFQVLSPLVPTREAYFLRYVEQNAENGNWAIVDFPIDSFHDQMQ
PPSTNSPHEYKRKPSGCIIQDMPNGYSQVKWVEHVEVDEKHVHETFAEYVKSGMAFGANR
WLDVLQRQCERIASLMARNITDLGVISSAEARRNMMRLSQRMVRTFCVNISTAYGQSWTA
LSETSKDTVRITTRKMCEPGQPTGVVLSAVSTTWLPFTHHQVFDLIRDQHHQSLLEVLFN
GNSPHEVAHIANGSHPGNCISLLRINVASNSWHNVELMLQESSIDNSGSLIVYSTVDVDS
IQLAMNGEDSSNIPILPLGFSIVPVIPPEGISVNSNSPPSCLLTVAIQVLASNVPTAKPN
LSTVTTINNHLCATVNQITSALTSTVTPAIASSAAVSKQEAS
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaatcggagaaggtaatgtgatgacttcggacaacattagatttgcttcgcag
cagccgtcttcttcttctcctggaacaatccaaaaccctaattttaatttcatccctttc
aactcattttcatccatcatcccnnnnnnnnnnnnnnnnatgatgagtatgatgatgatg
atgggagatggaacagtagaggaaatgatggaaaacgggtcggcaggtgggtcattcggg
tcgggtagtgagcaagcagaggatccaaagttcggaaacgaatctgatgttaatgaactt
caagacgatgaacaacctcctccggctaagaagaaacgttatcacagacacactaatcgt
cagatccaagaaatggaagcgttgtttaaagaaaatcctcatccagacgacaaacaaaga
aagagattaagtgctgaacttggtctcaagccacgacaagttaagttttggttccaaaat
aggcgtacccaaatgaaggcacaacaagacagaacagagaatgcgatgttaagggcagag
aatgctaatcttaagtcggagaattgccatcttcagggggagctaaggtgcctctcatgt
ccttcttgcggcggccccaccgtcctaggtgacattcctttcaatgaactccacattgag
aattgtcgcctccgtgaagagcttgatcgtatatgctgcatcacttcaagatacactggt
cgtccgatgcaatccatgccatcatctcagccgttgatcgatccttcttctacgcttcca
catcatcaaccttcattggagctagacatgagcgtatacgctgggaactttccagaacat
tcttgtgctgacatgatgatgctccctccacaagatacaacttgtttcttcccagatcaa
actgtcaacaacaacatgttacttgcggaggaagaaaaggttatcgctatggaaatagct
gtctcttgtgtccaagaactgactaaaatgtgtgacacagaagagcctttgtggattaag
aagaaatcagataagatcggaggcgagattttgtgtctgaacgaggaagagtacatgaag
ttgttcccatggccagtggagaatcataacaacaaagcagattttgctcgagaagcttca
aaggctaattcagtcgttatcatgaacagcataacgctagttgacgcatttctaaacgct
gataaatggtcagagatgttctgttcaatcgtggctagggccaaaacggttcagatcatt
tcatctggagtctctggagctagtggttctcttctactgatgtatgcagagtttcaggta
ctatcaccactggttccaactcgagaagcttatttcctacggtatgtggaacaaaacgcg
gaaaacggaaattgggcaatcgtagatttcccgattgatagcttccatgaccaaatgcag
ccaccgagtactaattctcctcatgagtataagaggaaaccttcaggctgtatcattcaa
gacatgcctaatggatactcacaagtcaagtgggtagagcatgtggaagtagacgagaag
cacgtgcacgagacctttgctgagtatgtgaaaagtggaatggcctttggagctaaccgt
tggctcgacgtgttgcagagacagtgcgagaggatcgctagtctaatggctagaaacata
actgatcttggagtgatatcatcagcagaagcgaggagaaacatgatgaggttatcacag
aggatggtgagaacattctgtgtgaatataagcactgcctatggacaatcttggacagct
ttgtctgagacaagcaaagacactgtgaggatcacaacgaggaaaatgtgtgaacctggt
caacctacaggagttgttctttctgctgtctcaaccacttggcttccatttactcaccat
caagtctttgatcttatccgtgatcaacatcaccaatctctgctagaggttttgttcaat
gggaactcacctcatgaagttgctcatatcgctaatggttcacatcctggaaactgcatc
tctcttcttcgaatcaatgtagcgagcaattcatggcacaatgtagagctgatgcttcaa
gagagctctatcgataactcaggtagcttaatcgtctactccaccgtcgacgttgactca
atccagctcgcgatgaacggagaagactcttccaatattccgattctacccctcgggttc
tccatcgtaccagtgattcctccggagggtatttcagtcaattcaaattctcctccgtcg
tgtcttctcaccgtcgcgattcaggttttggcgagcaacgtcccaacggcgaaaccgaat
ctctcaaccgtcaccaccatcaataaccatctctgcgccaccgttaatcagatcacctcc
gcccttaccagcaccgttacgccggcgatcgcatcttccgccgccgtttccaaacaagaa
gccagctga
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