Camelina sativa (false flax): 104760665
Help
Entry
104760665 CDS
T05044
Name
(RefSeq) THO complex subunit 5B isoform X1
KO
K13174
THO complex subunit 5
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104760665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104760665
03041 Spliceosome [BR:
csat03041
]
104760665
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104760665
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104760665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
CIDE-N
Motif
Other DBs
NCBI-GeneID:
104760665
NCBI-ProteinID:
XP_010481926
LinkDB
All DBs
Position
18:5961766..5965610
Genome browser
AA seq
821 aa
AA seq
DB search
MEDGEIEEGMVTADEIPTPEVTTTTETTQPPREPGKSPLELLRESKASVEEIVATMLSMK
KEGNHKSEIRELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMY
EKSHYVKAIKACRDFKSKYPDIDLVPEQEFFRDAPEAIKDQSQSSDSSHVLMPKRLNFEL
HQRKELCKQRARLEQKKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNQLGIQHTKKL
KQHNLAELLPPPLYVLYSQLLAQKEAFEESIDLEVVGSLKDAQAYARQQSKKDSGVLNNP
ESSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKTGLYQVHPLKIFLHIYDDEMPDAKSF
KLVILKFEYLLKLNVVCVDAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQAFD
ENRTSRPYKWVQHLAGIDILPEVSPVLLGEEAHNTDSAKSDAFVPNLSLYRQQHRVQTVL
QRIRSRKKAHLALAEQLDLLMKHELPVVNCEDAPWALHKVLCALDSWLHIRPSASKSCSL
TLNSVEQVPEPMEIDVEGRSISGKEDLETIREDGELPSLVTAAASLTSSNHTPLKVSNQA
RSRQLALMTKNLDSPISKGKSPSFKIYEDDLDLVLDDDSEVDEPAGRTEAHVEALCPDNS
WVDYGAREFALVLSRKTDGGKLWKLEATVYISMEYPLRPPLFSLSLHASSSSENDNGTNE
SDHYNELRAMEAEVNLHMLKIIPSDQENYLLSHQIRCLAMLFDYYVDDPSPDSKRGTATT
VVDVGLCKPVDGKLLVRSFRGRDHRKMISWKGRGCASGYPC
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggcgaaatagaagaaggaatggtcaccgccgacgaaatcccgacgccggaa
gtaacgacgacgacggagactacacaaccaccgcgagagccaggtaaatctccactcgag
ttacttcgagagagcaaagcctccgtagaagaaatcgtcgcgacgatgctctccatgaaa
aaagaaggaaatcacaaatctgagattcgagaactcctcacacaaatgttcctcaacttc
gttaatcttcgtcaggcgaatcgtgcgattctgactgaggaagataaagtgaaagcggag
acggaacgagctaaagcacctgttgatttcacgacattgcaattgcataatcttatgtac
gagaagagccattacgttaaagctattaaggcttgtagggatttcaaatctaagtatcct
gacattgatcttgttcctgaacaagagttctttcgagatgctcctgaagctatcaaggac
caatcgcaatcaagtgatagttcacatgttttgatgcctaagagactcaattttgagctt
catcagaggaaagaattgtgtaagcaacgagcgagattggagcaaaagaagaagagttta
ctagaaaccattgcagagcgtaagaaatttttgtcaagtcttcctttacacctcaagtct
ctgaagaaagcatcacttccagtacagaaccagttgggtatacagcacacaaagaaactg
aagcagcataatttagctgagctgcttcctcctccgctttatgttctatactcacagctc
ttggcacaaaaggaagcttttgaagagagcattgatttggaggtagttgggagccttaag
gatgctcaagcttatgctagacaacaatcgaaaaaggactcaggtgtattgaataatcca
gagagttctaggttggaggacgatggacctgatgacgatgatgatggacaaaggagaaga
aaacgacccaagaaacttactagcaaagaaggttctgacaagacaggattatatcaagtc
caccctctcaagattttccttcacatatatgatgatgagatgcctgatgcaaaatccttc
aaacttgtcattctcaagtttgagtacctgctgaagttgaacgtagtatgtgttgatgct
gaaggctctcaggatggaccagagaaaaacatcttttgtaacttatttccagatgatgct
ggacttgagcctcctcatcagtcgaccaagctcatccttggtgatggtcaggcatttgat
gagaacagaacttcaaggccttacaaatgggtacaacatttggcgggaattgatatttta
ccagaagtgtcaccagttttactaggcgaagaagctcataacactgactcagctaaaagt
gatgcgtttgtgcctaatctctcattgtatcgccagcagcatagggtgcaaacagttctg
caaagaatacgctcgcggaagaaagcgcatctggctcttgcggaacagcttgatttgctc
atgaaacatgagttaccagtggtcaactgcgaagatgctccgtgggcactccataaggtt
ctctgtgctttggattcctggttacatatacggccttcggctagtaagtcatgctctctg
actctgaacagtgtggaacaagttccagaacctatggaaatcgatgtagagggaagatct
atttctggaaaggaagatcttgaaactatacgggaagatggagaacttccctctttggtc
acagcggctgcttcgttaaccagttccaatcataccccattgaaagtatctaatcaagca
cggtcaaggcagttggccttgatgacaaagaacctagattctccaattagcaaaggaaag
tcaccaagtttcaagatatacgaagatgatttggatcttgttttggacgatgatagtgaa
gtagatgagccagccgggagaactgaggcgcatgtggaagcattgtgccctgataattca
tgggtggattatggtgcgagagagtttgcgcttgtgctctccaggaaaacagatggcgga
aagttgtggaagttagaagcaacggtctatattagcatggagtatcctcttcgacctcct
ttgttttctctgtctctccatgcttcttcttcgtcagaaaatgacaatgggacaaatgaa
agtgaccattataatgaacttcgagcaatggaagcagaagtgaaccttcatatgttgaag
attattccttcagatcaagaaaactatctcctatctcatcaaatcagatgcttagcaatg
ttgttcgactactacgtggacgacccatctccagattctaaaagaggaacagcgacaact
gtggttgatgtcggtttgtgcaagcctgtagacggtaagcttcttgtgagatcattcaga
ggcagagatcaccggaaaatgatctcatggaagggcagaggatgtgcatcgggttatccg
tgctag
DBGET
integrated database retrieval system
