Camelina sativa (false flax): 104761130
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Entry
104761130 CDS
T05044
Name
(RefSeq) branchpoint-bridging protein-like isoform X1
KO
K13095
splicing factor 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104761130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104761130
Spliceosome [BR:
csat03041
]
Complex A
Other components
Complex A specific factors
104761130
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
eIF3g
RRM_5
PHD_4
KH_PNO1_2nd
RapA_C
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
104761130
NCBI-ProteinID:
XP_010482464
UniProt:
A0ABM0X8Z5
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All DBs
Position
18:complement(11351484..11357482)
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AA seq
806 aa
AA seq
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MASVELNNSNSDSHTLEQPPPPSNGDTAPLASDHLNPDSVALNGSSAPNPDTNGSVAKPE
LLRPLISENGVSKTLSGNDKDQSGGEEETSSRRKRRSRWDPPPSESSNNASVEGGNDSGT
GTRKRKSRWADDEPKTQIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRMLQSGMPLDDR
PEGQRSPSPEPVYDNMGIRINTREYRARERLNRERQEIIAQIIKKNPAFKPPADYRPPKL
QKKLFIPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRHQQKKDMKY
DPSENEDLHVLVEAETQDALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDEE
FCRLCGEPGHRQYACPSRTNTFKSEVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQNFLA
ELGGTVPESSLKQSATLALGPGSSGSNPPWANNAGNGASAHPGLGSTPTKPPSKEYDETN
LYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRITGLSRGYGFVKYADVQMANTAVQSM
NGYRFEGRTLAVRIAGKSPPPTAPPGPPTPQAPTQGYPPSNQPPNAYPSQQYATGGQLPP
PVGYATAPVPWGPPVPSYSPYAPPPPPPGSYHPVHGQHMSPYGMQYPPPPPPHVAQAPPP
GTTQNPSSSEPQQSFPPGVQADSGAATSSVPPNVYGSSVTTMPGQHPYMSYPSYYNAVPP
PPPAPASSDHSQTMGNMPWANNPPVSTPDHTQGLVNAPWAPNPPMPPTVGYSQNAPWAPK
PPVPPPAENPSSVGDSEYEKFMAEMK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtcgaattaaacaattccaattctgattcgcataccctagagcagcctcct
cctccctccaatggagacactgctccactcgcatcggatcatttgaatccggattccgtg
gctctaaacggttcttctgctcctaatccagacactaacggctcagtagcaaagcctgag
ctcttacgccctttgatatcggagaacggtgttagcaagacgctgagtggtaacgataag
gatcagtccggtggtgaggaggagacttcaagccggaggaagcgtcggagccggtgggat
cctccgccttctgagtcaagtaataacgctagtgttgaagggggtaatgattccggtact
gggactaggaagcgtaagtcgagatgggcagatgatgagccgaagacgcagattcagttg
cctgatttcatgaaggatttcactggaggtattgagtttgatcctgagattcaggctttg
aatagtaggttgcttgagattagtaggatgttgcagtctggtatgcctttggatgataga
ccggaaggacagaggtctccttcaccagagcctgtgtatgataacatgggaatcaggatt
aacactagagagtatagagcaagggagaggttgaatagagaaagacaagaaattattgct
cagattatcaagaagaatccggcttttaaacctccggcagattatagacctcctaagctc
cagaagaagcttttcatcccgatgaaggagtttcctggttacaattttattggtttgatt
attggccctaggggtaatactcagaagagaatggagagggagacaggtgctaaaattgta
attcggggtaaagggtctgtgaaagaaggtagacatcagcaaaagaaggatatgaaatat
gacccttcagaaaatgaggacttgcatgttttagtcgaggctgagactcaggatgctctt
gaagctgctgcgggtatggttgagaagcttctgcaacctgttgacgaggtcctgaacgaa
cacaagaggcaacagctcagggaacttgccacgttgaatgggacaataagggacgaagaa
ttctgtagactgtgtggtgagccaggacataggcagtatgcgtgtccttctcgtaccaat
acctttaagagtgaagttctttgcaagatttgtggtgatggtggacaccctactattgat
tgcccggtgaagggtactactgggaagaaaatggatgatgaatatcagaacttcttggca
gagttaggaggaactgtccctgaatcttctctcaaacagagtgctaccttggctcttggt
cctggaagttcgggaagtaatcctccatgggctaacaatgcagggaatggtgcaagtgcg
catcctggcttagggtcgactccgaccaaacccccgtccaaagaatatgatgaaacaaat
ctgtacattgggtttttacctccgatgcttgaggacgatggtttgattaatctgttttca
tcgtttggtgaaattgtgatggcaaaggtaatcaaggaccgtataactgggctgagcaga
ggctatggttttgtgaagtacgctgatgtccagatggctaatactgctgttcagtcaatg
aatggatatcggttcgaaggccgaacactcgctgtcaggattgctggtaaatcgccaccg
cctactgcacctccaggacctccaacccctcaagcaccaactcaaggttatcctccctca
aaccagcctcctaatgcctatccttctcaacagtatgcaactggtggtcaactgccacct
cctgtaggttatgcaacagctccagttccttggggtcctcctgttccctcctattctcct
tatgctcctccccctcctcctcctggttcataccatcctgtccatggtcaacatatgtct
ccttatggaatgcaatacccaccaccaccacctcctcacgtggcacaagcacctccacct
ggcactactcaaaacccatcttctagtgaaccccagcaaagcttcccaccaggagtacaa
gctgacagtggtgctgctacctcgtctgtaccaccaaatgtctatggtagctccgtcacg
actatgcctggacagcatccatatatgagttatccgtcttattacaatgctgttcctcca
cctcctccagcaccggcctcatctgatcattcccaaaccatgggtaacatgccatgggcc
aacaatccgcctgtctcaacacctgaccacacacaaggacttgttaatgcaccttgggca
cctaacccccctatgccgcccactgttggatattcacagaacgcaccctgggctccgaaa
cctccagtaccgccacctgcagagaatccatccagtgttggagattccgagtatgagaag
ttcatggctgaaatgaagtag
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