Camelina sativa (false flax): 104761211
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Entry
104761211 CDS
T05044
Name
(RefSeq) serine/arginine-rich splicing factor RS41 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104761211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104761211
Spliceosome [BR:
csat03041
]
Common components
Common spliceosomal components
SR proteins
104761211
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RNA_bind
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
104761211
NCBI-ProteinID:
XP_010482553
LinkDB
All DBs
Position
18:11847373..11850988
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AA seq
334 aa
AA seq
DB search
MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRYEY
GRTGRRLRVEWTKNDRVAAGRSGSGSRRSSSSMRPSKTLFVINFDAQGTRTRDLERHFEP
YGKIVNVRIRRNFAFIQYESQEDATRALESTNSSKLMDNVISVEYAKKDDDARGNGYSPE
RRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHRRERTSPDYGRGRRSPSPYRRARLS
PDYKRDDRRRERVASPENGAVRNRSPKKERDESRSPPPYEKRRERSRSRSKSSPENGQVE
SPGQIMEEDAVRGYDGAESPIRESSPSRSPQAEE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgtcttctgcgggaactttgagtatgatgctcgtgagagtgatcttgagagg
cttttcagaaaatatggcaaggtcgagagggttgatatgaaagctggctttgcttttgtc
tatatggaagacgagagagatgctgaagatgccatccgagcgcttgatcgctatgaatat
ggccgcacgggacgcagactccgtgttgagtggacaaagaatgaccgtgtagctgctgga
agatcaggtagtggctcaaggagatcatcgtctagcatgagaccttccaagactctgttt
gtgatcaacttcgatgcacagggcactaggactcgggacttggagagacactttgagccg
tatggaaaaatcgttaatgttagaatcagaaggaactttgcgtttatccaatatgagtcg
caagaagatgctaccagagcgctggaatctacaaattcaagtaagctgatggacaacgtg
atctcagtggagtatgctaagaaagatgatgatgcgagagggaacggatacagtcctgaa
agacgccgtgataggtcacctgataggagaaggcggtcaccgagtccttacagaagagaa
aggggaagtcctgactatggccgaggtgctagtccagtagctcacaggagggaaaggact
agtcctgattatggtcgcggacgacgcagcccgagcccttacaggagagccagacttagc
cctgattataagagggatgaccgtagaagggagagggtggctagccctgagaatggagct
gtgaggaaccgaagtccaaaaaaggaacgtgatgaaagcaggagccctcctccatatgag
aagaggagggagagatcgaggtcaaggtcgaagtcaagccctgagaatggtcaagttgaa
agccctggacagataatggaagaagatgcagtaagaggatatgatggtgcagaaagccca
atacgcgagagcagcccctcgcgttcgcctcaagcagaggaatga
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