Camelina sativa (false flax): 104761463
Help
Entry
104761463 CDS
T05044
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104761463
Membrane trafficking [BR:
csat04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
104761463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
bL31_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
104761463
NCBI-ProteinID:
XP_010482851
LinkDB
All DBs
Position
18:complement(13555740..13563917)
Genome browser
AA seq
1259 aa
AA seq
DB search
MANYLAQFQTIKNSCDRLVAAVEDVSDLWPTVKGLFEEHQPLKRAFLTNKTRNPVFIENL
PVEFILTTDARLRSRFPQEQYLFWFREPYATIVLVTCEDLDEFKNILKPRLKLIVQNDER
EWFIVFVSKAHPSNDQATKSVKKVYAKLEVEFSSKKRERCCKLDVHGPDGNFWEDLELKI
TECIRNTLDRRAQFYEDEIRKLSEQRFMPIWNFCNFFILKESLAFIFEMAHLHEDALREY
DELELCYLETVNMPGKQRDFGGFDSEDDQAALLKPGSKPLTQIVQDDSFREFEFRQYLFA
CQSRLLFKLNRPFEVASRGYSFVISFAKALTLHESVLPFCMREVWVITACFALIEATASH
HHDGVVAPDIEKEFYRLQGDLYSLSRVKFMRLGYLIGYGTDIEKSPLNSACLSMLPWPKP
AVWPSLPQDASSEVLEKEKTILQATLRTKHFGIQQKALPLEPSVLLRVANRRRASLSTGN
IPEIFDGRPSFTEGSGLEASPRTPSSHKVQAASMSRTNSSPGNFESPLDRPMRLAEIFVA
AEHALRLTISDNDLMKTLSSIQDFENKYLNLTKGAAENYHRSWWKRHGVVLDGEIAAVCF
KHGKYDLAANSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDQAGYMSSCVRLLSLDK
GLFSSKERQAFQSEVLTLAHSEMKNPVPLDVSSLITFSGNTGPPLQLCDGDPGNLSVTVW
SGFPDDITLDSLSLTLVATNNTDEGGQALKSSAATVLKPGRNTITFALPPQKPGSYVLGV
VTGQIGRLRFRSHSFSKGGPADSDDFMSYEKPTRPILKVSKPRALVDLAAAVSSALLINE
AQWIGIIVRPIAYSLKGAILHIDTGPGLKIEDSYGIEMESYMDTDCDASASKADVLVEES
PVPPIRDSEVLNLCDGKIVFSDWASNVSSILWVPVRALSEKLARGSSSVNPLKQDILEGM
RTVALKLEFGVHHNQIFERTIAAHFTDPFDVTTRVANKCNDGTLVLQVMLHSLVKANLIV
LDAWLDLQDGFVHGQNDGRPTSTFFPLVVSPGSRAAVVFSLCLDKTMSSEGKDLQLPESI
LNIKYGIHGDRAAGAHKPVDADNSGTDTEGRDLVFKSAIVLQRPVLDPCLTVGFLPLSSD
GLRVGKLITMQWRVERLKDLKESEAVELEHDEVLYEVNANSENWMIAGRKRGHVSLSEEQ
GSRVVISILCVPLVAGYVRPPQLGLPNVEEANVSSNPPGPHLVCVLPPLLSSSYCIPVK
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactacttggctcagttccagacgattaagaactcctgcgatcgtctcgtcgcc
gccgtggaagatgtgtctgatctgtggcctacagtgaaaggtttatttgaagaacatcag
ccattaaaaagagcgttcttgacaaacaagactcgaaatccggtttttattgagaacttg
ccggttgaattcattttaaccacagacgcgagacttcgtagtcgattcccgcaggagcaa
tatttgttctggtttcgagaaccatatgcaactatagttcttgtgacgtgtgaggatctt
gatgagtttaaaaacattctcaaaccacgtctgaaattaattgttcaaaatgatgagagg
gaatggtttattgtatttgtatctaaagctcatccaagtaatgatcaagcaactaagtct
gtcaagaaagtatatgcgaagcttgaagttgagttcagttcaaaaaaaagagaaaggtgc
tgtaagctcgatgtacatggccctgacggaaacttttgggaggatctggaattaaagatt
accgagtgcatcaggaataccttggataggcgcgcacaattctacgaggatgagatacgc
aagctcagtgagcagcggtttatgccaatatggaacttttgcaactttttcatcttaaag
gaaagtttggctttcatatttgagatggctcatcttcatgaggatgcattacgtgaatat
gatgaactagagctctgctatttggaaacagtgaatatgcctgggaaacagagggatttt
ggaggattcgacagtgaagatgaccaagctgcgctgttgaaaccaggaagcaaaccattg
acacagattgtgcaagatgattcttttagagaattcgagtttagacagtatctctttgcc
tgtcaatctaggctgttgttcaaattgaatcgtccttttgaagttgcatcgaggggatac
tcttttgttattagttttgcaaaggccttaaccctccatgagagtgtactgcccttctgt
atgcgggaagtttgggtaattactgcatgtttcgcgctgattgaagcaactgcttctcat
caccatgatggagtggttgcacctgatatagagaaggaattctaccgtcttcagggtgat
ctctattcactttcacgggttaagttcatgagacttggatatctgataggatatggaaca
gacatagaaaagagtccactgaacagtgcttgtctcagtatgctgccttggccaaaaccg
gcagtctggccatctcttccacaagatgcttcctctgaggtgcttgaaaaagaaaagact
attctccaagcaactttaaggaccaagcactttggtattcaacagaaagctttacctctt
gaaccatctgtccttttacgtgtggctaacagaagaagggcttctctttctactggaaat
attcctgaaatatttgatgggcgcccaagttttaccgaaggatcaggtttagaagcatct
ccgagaacaccttcatctcataaagtacaagcagcttctatgtcgagaacaaattcttca
cctggaaattttgagagtcccctagataggcctatgcggcttgctgaaatttttgttgca
gctgagcacgctctgcgacttaccatttcagataatgatttgatgaagacattgtcatct
attcaggattttgagaataaatatcttaacctaactaaaggtgctgccgaaaactatcac
cgttcttggtggaagagacatggagtcgttcttgatggggaaattgcagctgtctgcttc
aagcacggaaagtatgatttggctgcaaactcttatgaaaaagtttgtgccctttatgcg
ggtgaaggatggcaagatttactggcagaagtcttacctaatttagctgagtgtcaaaag
attcttaacgatcaagctgggtacatgtcatcttgtgttagactactttcgttggataaa
ggtttattctcgtccaaggagcggcaagcttttcagtccgaggttcttactcttgcacac
agtgaaatgaagaacccagttcccttagatgtgtcatcgttgatcacgttttctggaaac
actggccctccacttcagctgtgtgatggagaccctgggaatctatctgttactgtatgg
agtggctttcctgatgatatcacccttgattcgcttagtcttactttggtagccaccaac
aacactgacgaaggcggccaggctttaaagagttccgctgcaactgtgctaaagcccgga
aggaatactatcacttttgctttgcctccacaaaaacctggttcctatgtcttgggagtc
gtcactggccagattgggcgcttgagattcaggtctcacagcttttcaaagggtggtccc
gcagatagtgatgacttcatgagttatgaaaagccaaccagacctatcctgaaggtttcc
aaaccaagagctctggtcgatcttgctgcagctgtatcttctgcgctgctaataaatgaa
gcccaatggattggtatcatagtacgtccaattgcttactcacttaaaggcgccatcttg
cacattgatactggtccagggctaaagattgaggactcgtatggcattgagatggagagt
tacatggacacagactgtgatgctagtgcatcaaaagctgatgttttagtagaagagagt
cctgtccctccgatacgggattcagaggtgcttaatctttgcgatggtaaaatagtgttt
tcagattgggcaagcaatgtgagttctattctatgggtccctgttcgtgcattgagtgag
aagcttgctagagggtcatcttcagtcaatccgctgaaacaagatattttagagggaatg
agaactgtagctttgaaacttgagtttggggttcatcataaccagatatttgagagaacc
atagctgcacatttcaccgacccatttgatgtgaccacaagggtggcaaacaaatgcaat
gatggtactttggtcttgcaggtcatgctacactccctagtcaaggcgaacttgatagtt
cttgatgcttggcttgatcttcaagatggatttgttcatggacaaaatgatggaagaccg
acttcaacgttttttccgcttgttgtgtctccaggatctagagcagcagtcgtgttcagt
ttatgcctagacaagactatgtcatcagaaggaaaagatttgcaactaccagagagcatt
ctgaatatcaaatatggaatccatggagatagagcagctggggcacacaagccagtggat
gcagataactctggaactgatactgaagggagagatttggtgttcaagagtgctattgtt
ttgcaacgtccagtgcttgatccttgcctcacagttggattccttccactttcttctgat
gggcttagggtcgggaaacttatcaccatgcagtggagagtggaaaggcttaaagatctc
aaagaaagtgaagccgtagaactagaacatgatgaggtgttgtatgaagtcaatgcaaat
tcggagaactggatgatcgctggtaggaagagaggccatgtctctctctcagaggagcaa
ggttcaagagtagtaatctcgatactgtgtgtcccgttagtagcgggttatgtccgtcct
cctcaactcgggttgccaaacgtagaagaagcaaatgtaagcagcaatccaccgggtcct
cacttggtatgcgtcttgccaccacttctaagttcttcctactgcatccctgtcaagtaa
DBGET
integrated database retrieval system
