Camelina sativa (false flax): 104761599
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Entry
104761599 CDS
T05044
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X2
KO
K14411
RNA-binding protein Musashi
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104761599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104761599
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104761599
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
104761599
NCBI-ProteinID:
XP_010483006
LinkDB
All DBs
Position
18:complement(14234147..14237461)
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AA seq
456 aa
AA seq
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MESDLGKLFVGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVA
ERVIMVDKHIIDGRTVEAKKAVPRDDQQVLKRHASPNHLMLSPVHGGGGGARTKKIFVGG
LPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLLKTFHELN
GKLVEVKRAVPKEIPPHASSNRSPLPLGVNYGGGVSNRMSANSYFNNFAPGPGFYNNLGG
SVGGRFSPVIGSGRNAASAFGLGLNHELSLNLNPSYDGTTSTFGYNRVPSNTYFNGASPN
RYTSPIGHNRTDSPYNSNNRDLWGNRTDTARPGWNLNENNRGNWGLPFSSAVANDNNGGY
GRNFGTGSGLSSSPFNGFEGSIGELYRGSSVYSDSTWQQQQQQQLPSQSSHELDNLSRSY
GYDIDNVGSDPSANDSERYNGSHNVGNRQTNRGIEA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggatctggggaagctcttcgttggtgggatttcgtgggatacagatgaagaa
aggttaagagactattttagcaactacggtgatgttgttgaagctgtgatcatgagagac
cgtgccactggtcgtgctcgtggctttggtttcattgttttcgctgatccttgtgttgct
gagagagtcatcatggtcgacaaacacatcatcgatggccgcacggttgaggcgaagaag
gccgtgcctcgagatgatcagcaggtgctaaaacgacacgctagtcctaaccaccttatg
ttgtcacctgtccatggtggtggtggtggtgcaaggacgaagaagatctttgttggaggt
ttaccgtccagcattaccgaggaagagttcaagaactactttgatcagtttggtactatt
gctgatgttgtggtaatgtatgatcataacacgcagaggcccagagggtttggtttcatt
acttttgattcagatgatgctgttgatagagttcttctcaaaacctttcatgagctcaat
ggaaaactagtcgaggtcaaaagagcggtacctaaggagattcccccccatgcttctagt
aaccgaagcccgcttcctctcggtgttaactatggtggaggcgtgtctaataggatgtct
gctaatagctactttaacaactttgctcctggtcctggtttttataacaatctaggaggc
tctgttggtggtcggtttagtcctgttattggtagtggtagaaatgcggcttctgctttc
ggcctcggtttgaatcatgaactgagtttgaatttgaaccctagctatgatgggactact
tctacatttgggtataaccgggttccaagcaacacttacttcaacggtgcttccccaaac
cgttacacctctccaatcgggcacaatagaactgactctccttacaattctaacaataga
gacttatggggaaacagaaccgatactgcacgtcccggttggaacttgaatgaaaacaac
agaggaaactggggacttcctttttcttctgctgttgctaatgataacaatggcggttat
ggaagaaactttgggacaggttctggactttcctcgtccccatttaacggttttgaaggt
tctataggggaattgtacagagggagctcggtttacagcgactcaacgtggcagcaacag
caacagcagcagctaccatctcagtcttctcacgagctagacaatttgtctcgctcttac
ggctatgacattgacaatgtaggttcagacccatctgcaaatgactcagaaagatacaat
ggaagccacaatgttggaaatagacaaactaatagaggtattgaggcatag
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