Camelina sativa (false flax): 104761618
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Entry
104761618 CDS
T05044
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
csat03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104761618
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104761618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104761618
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104761618
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
104761618
NCBI-ProteinID:
XP_010483029
UniProt:
A0ABM0XAE0
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Position
18:complement(14310449..14314079)
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AA seq
702 aa
AA seq
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MDEGDGRDQMDQFHQNEAISAVADDGFMAEEEDDDYEDLYNDVNVGEGFLQSVKKSDEAG
SRNEEEKEKVCIDGEDRVEPVLGTPEAEVSIPGLVGDSVVKEGEAGGSGGTDVVVASSGY
GAQDVKVSDVSQEIPDGIGAGTGGGLRVELGPAANRATDLEVPRGNNISQGLLPPPPHVL
GNNENLMRPVMGNVNGGTPPGPGINMVGNGGNIAMPGVVGGGTGGGGNGTFLFVGDLHWW
TTDAELEAELCKYGAVKEVKFFDEKASGKSKGYCQVEFYDPMAATACKDGLNGYAFNGRP
CVVEYASPYSVKRMGEAQVNRTQQAQSVIAQAKRGGPADPPSKPVVANNNTAIGGNFQGG
GNRGFGRGNWGRGNAPGGRGPGGPMRNRPNGMGRGLIGNGAFGQGMGTGPPMNMMHQPMM
GQGFEQAFGGPMARMGGYGGFPGAPGPPFPGLLSSFPPVGGVGLPGVAPHVNPAFFGRGM
PMNGMGMMPNAGVDGGHNMGMWDPNSGGWASGEDLGGGRAAESSYGEEAASDHQYGEVNH
DRGRPNPVKDKERASEREWSGSSDRRIREDKDAGYERDIPREKDVGHGYEMPERRHRDDR
DTGREREREHHHKDRERSRDRERERDRDRERDRERDRHREGSSQRYGGDHRTRHRDEPEH
DDEWNRGRSSRGHSKSRLSREDNHRSRSRDADYGKRRRLTTE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggatgagggagatgggagagatcagatggatcaattccatcaaaacgaggcgatatct
gccgtagctgacgacgggtttatggcggaggaagaggatgatgattatgaggatctttac
aacgacgttaatgttggagaagggtttcttcagtctgtgaaaaagagcgacgaagcggga
tcgagaaacgaggaggagaaggagaaggtttgcatcgatggggaagatagggttgaacca
gttttaggtacgcccgaagctgaggtttcgatacctggtttggttggtgatagcgttgtt
aaagaaggagaagcaggaggaagtggtggtactgatgtggtagtcgcttctagtggatat
ggagctcaagatgttaaggtaagcgatgttagccaggagattcctgatggaattggtgct
ggtactggaggagggcttagagtagagctagggccagctgctaatcgggcaactgatctt
gaggttcctagaggaaataacatttctcagggtctcttgccaccaccgccgcatgtctta
ggaaataacgagaatttgatgagacctgtgatgggtaatgttaatggtgggactcctcct
ggacctggtattaacatggttgggaacggaggtaatatagctatgcctggtgttgttggc
gggggaactggtggaggaggcaatgggacttttcttttcgttggggatttgcattggtgg
acaactgatgctgagcttgaggcagagttgtgcaagtatggtgctgtgaaggaggttaag
ttctttgatgagaaagctagtgggaaatcgaaagggtattgtcaagtagagttctatgat
cctatggcagctacagcttgcaaagacgggttgaacggttatgcattcaacggtaggcct
tgtgttgttgagtatgcgtctccgtattctgttaagagaatgggagaggcacaggtgaat
aggacccaacaggcacaatctgtaattgcacaagctaagagaggagggcctgctgatcct
ccgagtaaacctgtcgtggccaacaacaacaccgctattggcgggaatttccaaggtggg
ggaaatagaggatttggtagaggtaattggggtagaggcaatgctccgggtggtagagga
cctggtggtccaatgaggaataggcctaacgggatgggaagaggtttgattggtaatggt
gcttttggtcagggcatgggtacagggcctcctatgaatatgatgcatcaaccaatgatg
gggcaagggtttgaacaagcttttggtggacctatggccagaatgggtggctatggagga
ttccctggggctccgggtccaccgtttcctgggcttttatcttctttccctcctgtagga
ggagttggtttacctggagtggcacctcatgtgaatccagcgttttttggacgagggatg
ccgatgaatggaatgggaatgatgcctaatgctggtgttgatggagggcataatatggga
atgtgggatcctaatagtggaggatgggctagtggtgaagatttgggtggtggaagagct
gcggaatcgagttatggagaggaagctgcatctgatcatcagtatggagaggttaatcac
gatagaggtcgtccaaatcctgtgaaagataaagaaagagcttcagaaagggaatggtct
ggttcatctgatagaaggattcgtgaggataaagatgctggttatgaaagggacatacca
agggagaaagatgttggtcatggttatgagatgccagagagaaggcaccgtgatgataga
gacactggtcgtgagcgtgagagggaacatcatcataaggatcgtgaacgctccagagat
cgtgagcgagaacgtgatcgtgacagagaaagggacagggagagggatcgtcatagagag
ggatcgtcacaacgatatggtggtgatcatcgtactagacacagggacgaacctgagcat
gatgatgagtggaacagaggtcggtcatccagaggacacagcaaatcacggttgtctcgg
gaggataaccatcgctcaagatcaagggatgctgattatgggaaaagaaggcggcttact
actgaataa
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