Camelina sativa (false flax): 104761624
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Entry
104761624 CDS
T05044
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104761624
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104761624
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104761624
NCBI-ProteinID:
XP_010483043
UniProt:
A0ABM0XAF2
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Position
18:14330660..14332475
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AA seq
389 aa
AA seq
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MSIVLTIFLFFLNVSYAFAFAVPKPPIVRQLSTSVPSNSTESSCSSANGNVIDECWRCDE
KWKDNRRNLADCAVGFGRDAIGGRAGEYYTVTDSGDDNPLNPSPGTLRYGATQDQPLWII
FDRDMVIKLKQDLQVASYKTIDGRGNNVQIGYGPCLTLYKVSNIIINNLYIHDCVPTKRS
LGGYSDGDGISIFESRDIWIDHCTLERCYDGLIDAVNGSTDITISNNYMLNHNEVMLLGH
SDEFSGDQDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYREWKMYAIGGSANPTIFS
QGNVFIASDNQFTKEITKRESVNGDDEWMEWNWKSEGDEMVNGAFFTPSGNEDSPSYAKM
SSMVARPASLLKAIHPSVGVLSCVTDQPC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgtattaacaattttcttgtttttcttaaacgtttcttatgcgtttgcgttt
gcggttcctaaaccgccaatcgtaaggcaactatcaacatcagtgccgtcaaattcaaca
gagtcttcttgctcatcagcaaatggaaacgtaatcgacgagtgctggagatgcgacgag
aagtggaaggacaaccgcagaaacctcgcggattgcgcggttggattcggacgcgatgcg
ataggcggtagagctggcgagtactacacggtaactgattcaggagacgacaatcctcta
aacccatctccaggtacgctacggtacggtgcaacacaagatcaacctctatggattatt
tttgatcgagacatggtaattaaactaaaacaagatctccaagtagcatcgtataaaacc
attgacggtagaggaaacaacgtgcaaataggttacgggccgtgtttaactttatataaa
gttagtaatataattataaacaatctttatatacacgattgtgtacctactaaacggtcg
ttgggaggatactcggatggagatgggatctcgatattcgagtctcgggatatttggatt
gatcattgtacgttagagagatgttacgatgggcttattgatgcggtgaatggatccacg
gatataacgatttcgaataattacatgttgaatcataatgaagtcatgcttttgggtcat
agtgatgagttttccggtgatcaggatatgcgagttacgatcgcctttaactattttggt
gaaggacttgttcagagaatgccgaggtgtaggcatggatattttcacatagtgaataac
atttatagggagtggaagatgtatgctattggtggaagtgctaatccaaccatctttagc
cagggaaatgttttcatagcttcagataatcagttcaccaaggagattacaaagcgagag
agtgtaaatggagacgatgaatggatggaatggaattggaaatcagaaggagatgaaatg
gttaacggcgctttctttacaccgtcggggaatgaggattctcctagctatgcgaaaatg
tcgagtatggtagctcgaccagcttcacttctcaaggccatacatccatcagtaggtgtt
cttagttgcgtaactgaccaaccttgttaa
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