Camelina sativa (false flax): 104761975
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Entry
104761975 CDS
T05044
Name
(RefSeq) protein DAMAGED DNA-BINDING 2-like
KO
K10140
DNA damage-binding protein 2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03420
Nucleotide excision repair
csat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104761975
09124 Replication and repair
03420 Nucleotide excision repair
104761975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104761975
03400 DNA repair and recombination proteins [BR:
csat03400
]
104761975
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104761975
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104761975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
AmyB_C
Motif
Other DBs
NCBI-GeneID:
104761975
NCBI-ProteinID:
XP_010483481
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All DBs
Position
18:complement(16203537..16206592)
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AA seq
562 aa
AA seq
DB search
MGITRNRKKTDPEIIIARDTDSELSSSEEEEEDKYPLSESEEEEEEEDEAVKNGGKIELE
KNKAKGKAPITVKLIKKVCKVCKQPGHEAGFKGATYVDCPMKPCFLCKMPGHTTMSCPHR
VVTDHGIPPTSHRITKNPIEFVFKRQIQPRIPPIKPKYVIPDQVHCAVIRYHSRRVTCLE
FHPTRNNILLSGDKKGQIGVWDFAKVYEKNVYGNIHFVQVNNMRFSPTNDDMVYSASSDG
TIGYTDLETGISSTLLNLNPDGWQGQKSWKMLYGMDINSEKGLVLAADNFGFLHMIDHRT
NNSTGEPILIHKQGSKVVGLDCNPVQPELLLSCGNDHFARIWDMRKLQPKASLNDLAHKR
VVNSAYFSPSSGTKILTTCQDNRIRIWDSIFGDLDLPSREIVHSHDFNRHLTPFKAEWDP
KDTSESLIAVGRYISENFNGTALHPIDFIDASNGQLVAEVMDPNITTITPVNKLHPRDDV
LASGSSRSLFIWRPQEETEMVEEKKDKKIIICSSESKKKGKKQKRGSDDEDDDDDMFSSK
GKNIKVNKSQAKTTKSTRKTKT
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgggtataacgaggaacagaaagaaaacagacccagaaatcatcatcgccagagataca
gattccgagttaagttcgtcagaagaggaagaagaagataagtaccctttgtcggagtcg
gaggaggaagaagaagaagaagatgaagcggttaaaaacggagggaaaattgaattggag
aagaacaaagccaaagggaaagcacccattaccgttaagcttatcaaaaaagtttgcaaa
gtttgtaagcagcctgggcatgaagctggatttaaaggagcaacctatgtagattgtcct
atgaaaccttgcttcctatgcaaaatgcctggccacactacaatgtcatgtcctcataga
gtggttactgaccacggaatacccccaacttcacataggattacaaagaaccctattgaa
tttgtgtttaagcgccaaatccaaccgaggattccccctatcaaaccaaaatatgtgata
ccggatcaagttcattgtgcagtcattcgataccacagcagacgtgttacatgtttggag
ttccatccaacaagaaataacattcttctctctggagataagaaagggcaaattggagtc
tgggattttgctaaagtgtatgagaagaatgtgtatggaaacattcacttcgtacaagtt
aacaatatgcggtttagtcccacaaatgatgacatggtttattctgcatcctctgatgga
acaattggttatactgacctggaaactggaatctcatcaacgttgcttaatctcaatccg
gatggatggcagggccaaaagagttggaaaatgctgtacggtatggatattaactcagag
aaaggtttagtgctagctgctgataattttgggtttcttcacatgatcgaccatcgtacc
aataacagtacgggtgagccaattttgatacacaagcaaggaagcaaagttgttggcctt
gactgcaaccctgtccagcctgagcttcttctcagttgtgggaacgatcattttgcacga
atctgggatatgcgtaaactacaacctaaagcttctctgaatgatcttgcacacaaacga
gtagtcaactctgcgtacttctctccatcatcaggcaccaaaatcctcacgacctgtcag
gacaaccgtattcgaatatgggactctatctttggggacttggatttgccaagccgagag
attgttcatagccatgatttcaatcggcatttgacgccattcaaagctgaatgggatcct
aaggatacctcggagtcactcattgcggttggtcgttacataagtgaaaacttcaacgga
actgctcttcacccaatagatttcattgatgcaagcaatggacagttggttgcagaggtt
atggatccaaacataacaactattactccagtcaacaagttgcatccgcgtgatgatgtt
ttagcctcaggaagttcaaggtccctattcatttggcggccacaggaggaaacagagatg
gttgaggagaagaaggataagaagatcattatatgttctagtgaaagcaagaagaaagga
aagaagcaaaagcgtggcagcgatgatgaagacgacgatgatgacatgtttagctctaaa
ggcaaaaacattaaagtcaacaagtctcaagcaaaaacaaccaagtctactcggaagaca
aaaacttaa
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