Camelina sativa (false flax): 104762023
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Entry
104762023 CDS
T05044
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 2
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104762023
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104762023
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104762023
03019 Messenger RNA biogenesis [BR:
csat03019
]
104762023
03041 Spliceosome [BR:
csat03041
]
104762023
Enzymes [BR:
csat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104762023
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
104762023
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104762023
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104762023
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104762023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
104762023
NCBI-ProteinID:
XP_010483533
LinkDB
All DBs
Position
18:complement(16398606..16401137)
Genome browser
AA seq
312 aa
AA seq
DB search
MAQQGQGSMDPAVLDDIIRRLLDYRNPKPGTKQVMLNESEIRQLCLVSREIFLQQPNLLE
LEAPIKICGDIHGQYSDLLRLFEYGGFPPTANYLFLGDYVDRGKQSLETICLLLAYKIKY
PENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKVFTDSFNCLPVAAVIDDKILCMHG
GLSPDLTNVEQIKNIKRPTDVPDSGLLCDLLWSDPSKDVKGWGMNDRGVSYTFGPDKVAE
FLIKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQ
ILKPADRRPRFL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaacaagggcagggaagcatggaccctgccgttctcgatgatatcattcgtcgt
ttgttggattacagaaaccctaagcctggaaccaaacaggttatgctcaacgagtctgag
atccgtcagctttgcctcgtttctagagagatttttcttcaacagcctaaccttcttgag
ctcgaagctcctatcaagatctgcggtgatattcatggacagtattcagatctattgagg
ctgtttgagtatggaggcttcccaccaacagctaactatttgttcttaggagattacgtg
gaccgtgggaagcagagtttggagactatttgtcttctcctcgcctacaaaatcaagtac
cctgagaactttttccttctacgaggaaaccacgaatgtgcttctattaacagaatctat
ggattctatgatgagtgtaaacgtcgattcagcgtgagactctggaaagtatttacagat
tcttttaactgtctccccgtggctgctgttatagacgataagatattatgtatgcacggt
ggtctttctcccgatttgactaacgtggaacagattaagaacattaagcgaccaactgat
gttcctgactctggtttgctctgtgatctgctttggtctgatcctagcaaagatgtcaaa
ggttggggaatgaatgaccgtggagtctcttacacgtttggtcctgacaaagtcgcggaa
ttcttaataaagaatgatatggatctcatctgtcgtgctcatcaggttgtagaggatgga
tatgagttctttgccgatagacagcttgtgactatattttctgctccaaactactgtggt
gaatttgacaatgctggtgctatgatgagtgttgacgaaagtttaatgtgctccttccaa
attcttaagcctgcggatcggaggccccggttcttatga
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