Camelina sativa (false flax): 104762320
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Entry
104762320 CDS
T05044
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD1-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
csat
Camelina sativa (false flax)
Pathway
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104762320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104762320
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104762320
Membrane trafficking [BR:
csat04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
104762320
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104762320
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104762320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank
Ank_3
Ank_2
BAR
Ank_5
Ank_4
PH_8
PH_11
DUF6444
PH_20
ANK_LRRK2
PH_13
BAR_2
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
104762320
NCBI-ProteinID:
XP_010483891
UniProt:
A0ABM0XCH1
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All DBs
Position
18:17907918..17913886
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AA seq
831 aa
AA seq
DB search
MHFSKLDDSPMFRQQMQSMEESAELLRMRCLKFYKGCRKYTEGLGEGYDADIGFVNALES
FGGGHNDPICVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNGDVHEVKE
ARKRFDKATIIYDQAREKYLSLRKSTRLDVAATIEEDLHSARTTFEQARFHLVSALSNAE
AKKRFEFLEAVSGTMDAHLRFFKQGYELLHQMEPFINQVLAYAHQSRECANYEMASLTER
MQEYQRQVDRETRNSNGSPTGDGMRHNSRNSQKVIEAVMQSAAKGKVQTIRQGYLSKRSS
NLRGDWKRRFFILDSRGMLYYYRKPWNWSSGNGSRSVVHRNITSENSPGLLSRWLSSHYH
GGVHDEKPVARHTVNLLTSTIKVDADQTDLRFCFRIISPTKVYTLQAENAQDQMDWIEKI
TGVIASLLSFQTPERAIMRLSTVDGGDTFSASDSGSLADPYDIEQAESGESTVENPMTGG
NRSRFSGCLQQHDMVKTEKPIDVLTRVLGNEKCADCGAPEPDWASLNLGVLICIECSGIH
RNLGVHISKVRSLTLDVKVWEPSVLTLFQSLGNVYVNSVWEEQLNSESRSSSASRSSGTP
KSERPRKLVVRKPGFNDPISVKELFIHAKYSERIFVRKAIDSQHFQAPFQELWENVRAND
KKSVYRHIVCSEADVNALRGQASYTVSMPLAKMMQLEAKEETLEAKFKSIEKEFQENPEG
YSQSSRTGESMVREETSNDCSLLHLACLSADIGMVELLLQYGAKINAIDSKGRTPLHHCI
ISRRYAIARLLLMRGGDPNAVDKENNIPVKYASETDLNDNELIALLTDSKR
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcatttctcaaagctcgatgattctcccatgtttcgccaacagatgcaatctatggaa
gagagtgctgagttgctgcgaatgcgatgcttaaagttctataaaggttgcagaaaatac
acggaggggcttggagaagggtatgatgcagatattggctttgttaatgctcttgaatct
ttcggaggaggtcataatgatcccatctgtgttgcctttggaggtcccgttatgactaaa
ttcaccattgctctacgagaaatcgggacatacaaggaagttcttcgttcccaggtagaa
cacatgctgaatgatcggttgcttcaatttgtgaatggtgatgtccacgaagttaaggaa
gctcgtaaacggtttgacaaagctaccattatatatgaccaggcgcgagagaaatatctt
tcattaaggaagagtacgcgattggatgtggctgccacaattgaggaggacctacatagt
gcaagaacgacgttcgagcaagcccgatttcatctggttagtgcactctctaatgcggag
gctaaaaagagatttgaatttttggaagcagtaagcgggactatggatgctcatctccgt
ttcttcaaacagggttatgagctactacatcaaatggagccttttattaatcaggtgttg
gcttatgcacatcagtctagagaatgtgcaaactatgagatggcatcccttactgaaagg
atgcaggagtaccaaaggcaagttgatcgtgaaactagaaactcaaatggttctccaaca
ggggatggcatgagacataactcaagaaactcacagaaagtcatagaggccgtcatgcaa
tctgctgcaaaaggaaaggttcagactatcagacaagggtatttgtcaaaacgttcctca
aacttgagaggtgactggaaaagaagattctttatccttgatagccgtgggatgctatat
tattaccgcaagccatggaattggtcttcaggaaatggtagtcgctctgttgttcatagg
aatattacttcagaaaacagtcctgggctgctaagtcggtggctgtcttctcattatcac
ggcggtgtgcatgatgaaaaaccagttgcacgtcacaccgttaatctgctgacctcaacg
atcaaagttgatgcagaccagaccgatctaagattctgctttcgaataatttcaccaaca
aaagtttatacattgcaggcagagaatgcgcaggatcagatggactggatcgaaaaaata
actggagtaattgcttctttgttgagtttccagacacctgaaagagcaatcatgcgtctt
tctactgtggatggaggtgataccttctctgcaagtgattctggttctttagcagatcca
tatgatatcgaacaagcagaaagtggagaatccacagtggaaaatcccatgactggagga
aatcgttcgaggttttcggggtgcttgcagcaacatgatatggtaaagactgaaaagcca
attgatgtcttgacaagagtcttagggaatgagaaatgtgcagactgtggtgctcctgaa
cctgattgggcatctttgaaccttggtgtccttatttgtattgagtgttctggtatccat
cgtaaccttggtgttcacatttcaaaggtcagatcgctcactcttgatgttaaagtatgg
gaaccatcagtcttgacattattccaatcgttaggtaacgtgtatgtaaactcagtttgg
gaagagcagttgaactcggagagtagatcttccagtgctagtaggtcttcgggcactccc
aagtcagaacgacctagaaagttggttgtaaggaagcctggtttcaatgaccccatttct
gtgaaagagttgttcatccacgctaagtactcagagaggatttttgtccgcaaagcaata
gatagtcagcatttccaggcacctttccaagagttatgggagaatgtccgtgccaacgac
aagaaatcagtttacaggcacattgtctgctctgaagcagatgtgaatgctctgcgtgga
caagcatcgtacactgtgtctatgcccttagcaaagatgatgcaactggaagctaaggag
gaaacccttgaagccaaattcaagagcattgaaaaggaatttcaagagaatccagaggga
tattctcagtcaagtaggaccggggagagtatggtcagagaagaaacttcaaatgactgt
tctttgcttcaccttgcttgtctttctgcggatatcggtatggtggaactattgcttcag
tatggcgcaaaaataaatgcaatagattcaaaaggtcggactccacttcatcattgtatc
atcagcaggagatatgcaattgcaaggttgctacttatgaggggaggagatccaaatgct
gtggataaagagaataacataccggtcaaatatgcttctgaaacagacctcaatgataac
gaactgattgctttattaacagactccaaaagatga
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