KEGG   Camelina sativa (false flax): 104762449
Entry
104762449         CDS       T05044                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03082  ATP-dependent chromatin remodeling
csat03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104762449
   03083 Polycomb repressive complex
    104762449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csat03036]
    104762449
Enzymes [BR:csat01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104762449
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     104762449
   HDAC complexes
    Sin3A-HDAC complex
     104762449
    BRAF-HDAC complex
     104762449
    REST complex
     104762449
    SHIP complex
     104762449
    MiDAC complex
     104762449
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     104762449
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104762449
  Chromatin remodeling factors
   NuRD complex
    104762449
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 104762449
NCBI-ProteinID: XP_010484034
LinkDB
Position
18:complement(18532169..18534654)
AA seq 472 aa
MEADESGISLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRR
LEISRPNLADASDIGRFHSPDYVDFLASVSPESMGDPSSARNLRRFNVGEDCPVFDGLFD
FCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFR
RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGADNGKYYALNVPL
NDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFL
RSYNIPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNNLPFNEYFEYFGPDYTLHVDPG
PMENLNTPKDMEKIRNTLLEQLSGLMHAPSVQFQHTPPVNRVLDEPEDDMETRPKPRIWS
GTAAYESDSDDDDKPLHGFSGLDGPSMDRDSTGEDEMEDDDNPEPDVTPPSS
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggaggcagacgaaagcggtatctccttgccgtcgggacccgacggtcgtaagcggcga
gtcagttacttctacgagcccacgatcggtgactactactacggtcaaggacatccgatg
aaacctcaccggatccgtatggctcatagcctaatcatccactatcacctccaccgtcgc
ttagaaatcagccgtcctaacctcgccgacgcctccgatatcggccgctttcattctccc
gattacgttgatttcctcgcttccgtttcgccggaatctatgggcgatccttcctctgca
cgaaacctaaggcgattcaatgtcggcgaggactgtcctgtcttcgacgggctttttgat
ttttgccgtgcttccgccggtggttccattggcgccgccgtcaaattaaataggcaggac
gctgatatcgctatcaattggggcggtgggcttcaccatgccaagaaaagcgaggcctct
gggttttgctatgttaatgacatcgtgcttgggattcttgagttgctcaagatgtttagg
cgggttctctacgtagacatcgatgtccatcatggagatggagtggaagaagcgttttac
accactgatagagttatgactgtttctttccacaaatttggggactttttcccaggaact
ggtcacataagagacgtcggcgcagataatgggaaatactacgctctaaatgttccatta
aacgatggtatggacgatgagagtttccgcagcttgtttagacctcttatccagaaggtt
atggaggtgtatcagccagaagcagttgttcttcagtgtggggctgactccttaagcggt
gatcggttgggttgcttcaacttatcagtcaagggtcatgctgattgcctccgattctta
agatcttacaacattcctctcatggtcttgggtggtggagggtatactatacgaaatgtt
gcccgttgctggtgttatgagactgcagtagcggttggagtagagccggacaacaatctc
ccattcaatgagtattttgagtatttcggcccagattatacgcttcatgtcgacccaggt
ccaatggagaatttaaacacaccaaaagatatggagaaaataaggaacacgttgctggaa
caactttcgggactaatgcatgcacctagcgtgcagtttcagcatacaccaccagtaaat
cgagttttggacgagccggaagatgacatggagacgagaccaaagcctcgcatctggagt
ggaactgcagcttatgaatcagacagtgacgatgacgataaacctcttcatggtttctca
ggtcttgatggcccaagtatggacagggactctacaggtgaagatgaaatggaagacgat
gataacccagagccggatgtgactcctccatcgtcttaa

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