Camelina sativa (false flax): 104762451
Help
Entry
104762451 CDS
T05044
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 30 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104762451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104762451
03009 Ribosome biogenesis [BR:
csat03009
]
104762451
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104762451
Spliceosome [BR:
csat03041
]
Complex A
U1 snRNP components
U1 related factors
104762451
Complex B
104762451
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Helicases
104762451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
104762451
NCBI-ProteinID:
XP_010484038
LinkDB
All DBs
Position
18:complement(18540869..18544443)
Genome browser
AA seq
594 aa
AA seq
DB search
MSSYDRRFADPNSYRQRSGAPVGSSQPMDPSAAPYNPRYSGGGGGGGYGPSHVMAGDNSG
YNNRYPSFHPPTSGFSVGRGGGGGRGGYGQYGDRNGGGNWGGRGGSSNRELDSVSLPKQN
FGNLVHFEKNFYVESPSVQAMTEQDVAMYRTERDISVEGRDVPKPIKLFQDANFPDNILE
AIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDG
PIVLILAPTRELAVQIQEESRRFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVFATPGR
LTDMLECQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVE
SLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLALLKQLMDGSKILIFVE
TKRGCDQVTRQLRMDGWPALAIHGDKNQSERDRVLAEFKSGRSPIMTATDVAARGLDVKD
IKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELIKILQEAGQVVPP
TLSALVRSSGYGGSGGGRNFRSRGGGRGGGGGGFGDKRSRSTSNFVPHGGKRTW
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctatgatcgtagatttgctgatccaaattcgtatcgccaacgctctggcgcc
ccagttggttcgtctcagccaatggatccttccgccgcaccatacaacccacgttacagt
ggtggcggtggtggaggaggatatgggccgtctcatgtaatggcaggtgacaattccggt
tataataatcggtacccatctttccacccacccactagtggtttctctgttggtcgcggt
ggtggtggcggaagaggtggatacggtcaatacggggatagaaacggcggagggaattgg
ggaggacgtggtggatcgagtaatagagagctagatagcgtttctcttcccaagcagaat
tttgggaatcttgtacatttcgagaagaacttttacgttgagagtccttctgtgcaggcc
atgacggagcaagatgttgccatgtacagaaccgagagggatatctctgttgaaggtcgt
gatgttcctaagcctattaagttgttccaagatgctaatttcccagataatattctcgaa
gcaattgctaaactgggatttactgagccaacacctatacaagctcagggatggccaatg
gctttaaagggtagggatttgattggtattgctgagactggctctggtaagacattggct
tacttgttaccagctttggttcacgtaagtgcacaacctcgattgggtcaagatgatgga
cccatagtgttaatattagcccctacgagggaattagctgtccagatacaagaggaatca
aggaggttcgggttgcggtctggtgttagaagtacttgtatctatggtggtgctcctaaa
ggaccacagattcgcgatcttagaagaggtgttgagattgtatttgctacacctggtcgt
ttgaccgatatgctggagtgccaacacactaatttgaggagagtgacttaccttgtgctg
gatgaggctgacagaatgttggacatgggatttgaaccccaaattagaaagattgtatct
cagattcgacctgatagacagacacttctttggagtgcaacatggccacgagaggttgaa
tctcttgccaggcagtttctacgagatccatataaggccattattggatcaacagatcta
aaagctaatcagtctatcaaccaagtaatcgagattgtaccaacgccagagaaatacaac
aggctccttgcactgcttaaacagttaatggatgggagtaaaattctaatatttgtggag
acaaagagagggtgtgatcaagtgactagacaattgagaatggacggatggccagctctt
gccatacatggtgacaagaaccagtcggaaagagaccgagttttggcagaatttaagagt
ggacgaagcccgataatgactgccactgatgtagcagcaaggggacttgatgtgaaggac
ataaagtgcgtggttaactatgatttcccaaacaccttggaggattacatccataggatt
ggtcgaacagggcgtgcaggagctaaaggaatggcctttacattctttacacatgacaat
gctaagtttgcaagagagcttataaagatacttcaagaagctggtcaagttgtacctcct
actctgtccgcactagtgcgatcatctggttacggaggttctggtggtggacgaaacttc
cggtcaagaggaggaggacgtggtggtggtggtggtgggtttggagataaacggtcgaga
tcaacgtcgaactttgtacctcacggtggaaagaggacttggtag
DBGET
integrated database retrieval system
