Camelina sativa (false flax): 104762495
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Entry
104762495 CDS
T05044
Name
(RefSeq) probable pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104762495
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104762495
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104762495
NCBI-ProteinID:
XP_010484103
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Position
3:complement(1818486..1822642)
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AA seq
432 aa
AA seq
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MAVFLPTWVLAMMCLLFFVGAMENTTHNKISSFPRSDETEWNQHAVKNPDEVADEVLALT
EMSVRNHTERRKLGYFTCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRF
YVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANV
HIANGGCITIQYVTNVIVHGLHIHDCRPTGNAMVRSSETHFGWRTMADGDAISIFGSSHV
WIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNH
FGVGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTK
RVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASGSYARASSLSAKSSSLVGHITSDAG
ALPCRRGRQCSS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttttcttcccacatgggttttagcaatgatgtgtctactcttcttcgtcgga
gcaatggagaacactacacacaacaagatctcatctttccctagatccgacgaaaccgaa
tggaaccaacacgcagtgaagaatccagatgaagtagcggacgaagttctcgccttgact
gaaatgagtgtgagaaaccataccgagaggaggaagctaggttactttacttgcggaaca
ggcaaccctatcgacgactgttggcggtgcgatcgcaactggcacaagaaccgcaaacgc
ttagcggactgcgggatcgggtttggaagaaacgccatcggtggtcgcgacgggcgtttc
tacgttgtcactgacccgagagacgacaatccggttaatcctagaccgggtacattacgt
cacgccgtgatccaagacagaccgttatggatcgttttcaaacgcgatatggtgattcag
ttgaaacaagagctcatcgttaacagcttcaaaacgatcgatggacgtggcgcaaacgtt
cacatcgctaacggcggttgcatcacgattcagtatgtaacgaatgtgatcgtccacgga
ttacatattcatgattgcagaccgactggtaatgctatggtgagaagctcagagacacat
tttgggtggaggacgatggcggatggtgatgctatttcgatctttggctcgagtcatgtg
tggattgatcataactcgttgtctcattgcgctgacgggcttgtggacgcagtcatgggc
tcaaccgcgataaccatctctaacaaccacttaactcaccacaacgaggtgatgttgctc
ggacatagcgattcgtacatgagggacaaagctatgcaagtgaccattgcttataatcat
tttggagtcggacttattcaaagaatgccgaggtgtcgacacgggtacttccatgtcgtg
aacaacgactacactcactgggaaatgtacgcgattggtggaagcgcaaacccgacaatc
aatagtcaaggaaaccgatacgccgcccctaaaaacccctttgctaaagaggtcacgaag
agagtggacacaccggctagtcattggaaaggatggaactggagatcggaaggagatttg
cttcagaatggtgcttacttcacttcttcaggagccgctgcgtccggaagctatgcacgt
gcctctagtctctccgcaaaatcttcttcattggtcggacacattacttccgatgccgga
gctctaccttgtcgcagaggacgtcaatgttcgtcatag
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