Camelina sativa (false flax): 104762537
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Entry
104762537 CDS
T05044
Name
(RefSeq) DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
csat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104762537
03460 Fanconi anemia pathway
104762537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csat03032
]
104762537
03400 DNA repair and recombination proteins [BR:
csat03400
]
104762537
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104762537
DNA replication proteins [BR:
csat03032
]
Eukaryotic type
DNA Topoisomerases
104762537
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104762537
FA (Fanconi anemia) pathway
104762537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
104762537
NCBI-ProteinID:
XP_010484154
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All DBs
Position
18:18901925..18916521
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AA seq
920 aa
AA seq
DB search
MSRRGGGPVTVLNVAEKPSVAKSVAGILSNGSFRTREGRSRYNKIFEFDYAINGQPCRML
MTSVIGHLMELEFSDRYRKWHSCDPADLYQAPVMKHVPEDKKDIKKTLEEEARKSDWLVL
WLDCDREGENIAFEVVDVCRAVKHNLFIRRAHFSALIAREIHEAVQNLRDPNQLFAEAVD
ARQEIDLRIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQFPTLGFIVERYWEIQA
HEPEEFWTINCSHQSEEGIATFNWMRGHLFDYASAVILYEMCVEEPTATVMNVPHPRERF
KYPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFSSRTDLRAMV
EEQTRHPAWGSYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPTKFSSGESNWSRDHLNVY
ELVVRHYLACVSQPAVAAETTVEIDISGERFSASGRAILAKNYLEVYRFESWGGSVIPVY
EKGQQFIPTTLTLDSAVTRPPPLLCEADLLCCMDKAGIGTDATMHDHIKKLLDRGYATKD
ANTRFSPTHLGEALVMGYDDMGYELWKPNLRAVMEHDMNEVSVGRKTKAEVLETCLQQMK
ACFLDARVKKSKLLEAMTIFFERSNNTDEGENQTAGEVVRRCNLCNESDMALRKNRDGNF
MVGCMNYPQCRNAVWLPGPTLEASVTTNACQSCGPGPVYNILFKFRQIGIPPGFDVNHLG
CVGGCDDILKQLIDICGTGSRSQARRAPDTVPPNNIRGSNTRQSNVCVHCQQRGHASANC
PSRASASRNSRRTGTNPINDESTVSCNTCGAPCVLRTASTEANRGRKFFSCQTQGCSFFA
WEDSISNSSGNATTWSNSSGSGRRGSRGRGRGGRGGQSGGGRRGSGTSFVSATGEPVSGI
RCFSCGDPSHFANACPNRNS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacgaggcggtggccccgtgacggtgttgaacgtggcggagaagccgtctgtg
gcgaagtcagtggcggggattttgtcaaatggaagtttccggactcgagagggtaggtct
cgctacaacaaaatcttcgagttcgattacgccattaatggccagccatgtcgtatgcta
atgacttccgtcatcggtcacctgatggagcttgagttttccgatcgctaccgcaaatgg
cactcctgcgacccggcagatctataccaagctccggtcatgaaacacgttcccgaggac
aaaaaggatatcaagaagacactggaggaggaagcaaggaaaagtgactggcttgtgctg
tggcttgattgtgatagggaaggtgaaaacattgcatttgaagttgttgatgtttgcaga
gctgtcaaacataatctttttatacggagggctcatttctctgcgttaattgccagggaa
attcacgaagcagttcagaatcttagagatcctaatcaactgtttgctgaggctgtagat
gctagacaagaaatagacctacgcattggtgcttctttcactagatttcagactatgttg
ctgagagataggtttgctattgactccacgggtgaggagaggagtcgtgttataagttat
ggtccttgtcagtttcctacacttggctttattgtagagcgatactgggagatccaggca
catgaaccagaagagttctggacaatcaactgttctcaccaatcagaagaaggcattgcc
acctttaattggatgcgtggtcatctcttcgattatgcttcagctgtcatattatatgag
atgtgtgttgaagaacctactgccaccgtaatgaatgtcccacatccaagggaacgattc
aaatatcctccttatcctttgaacaccattgaacttgaaaaacgtgcttcaagatacttc
cgcctgagttcagagcacaccatgaaggtggcagaagaattatatcaggctggtttcatc
agctatcctcgtacagagactgattctttttcgagcaggacagatctacgtgctatggtg
gaggaacaaacaagacatcctgcatggggttcatatgcacaaagactactggaacctgag
ggggggctctggagaaaccctggtaatggtggtcatgatgacaaggctcacccacccatt
cacccaacaaagttttctagcggagagtctaactggagcagagatcaccttaatgtatat
gagctagttgttcgccattacctagcatgtgtttcccagccagcagttgctgctgaaact
accgtcgaaattgatatttctggtgagcgcttttctgcatctgggagagcaatattagct
aaaaattacctggaggtgtaccgctttgagtcatggggaggttcagtgattcccgtgtat
gaaaaagggcagcagtttatcccaacaacgttgactcttgattcagctgtaacaaggcca
ccaccgctattgtgtgaagctgacttactgtgttgtatggacaaggcaggcattggcacc
gatgcgacaatgcacgaccacataaagaaacttcttgatcggggttatgctacaaaagat
gctaatacacggttttctccaacccacctgggtgaggcgcttgtgatgggatatgatgac
atggggtatgaactttggaaaccaaatctcagagctgtcatggaacatgatatgaatgaa
gttagtgttgggaggaagactaaagctgaagttcttgaaacatgtttgcagcaaatgaaa
gcttgtttcttagatgcaagagtaaaaaaatcaaagctcctagaagcaatgacaattttc
tttgaaagatctaataacactgatgaaggtgaaaatcagacagctggtgaagttgtccga
cgatgcaatctctgcaatgaatcagatatggcactcaggaagaaccgggatggcaatttc
atggttggatgcatgaattatcctcagtgtcgaaatgcagtctggcttcctggaccgaca
ctggaagcatctgtcactactaatgcttgtcaatcctgtggtccaggcccagtctacaat
atacttttcaagttccgtcaaattggaattccaccaggctttgatgttaatcacttgggt
tgtgtcggtggctgtgatgacattcttaaacagttgatagacatatgtggaactggatcc
cgttctcaagcaaggagagctccagatactgtacctccaaacaatatccgaggaagcaat
acaagacagagtaatgtctgcgtacattgtcagcaacgaggacatgcttctgctaattgt
ccctcacgggcttcagcatctcgaaattctcgtcgtactggaacaaatccgataaatgat
gagagtacagtatcatgtaacacttgtggagcaccatgtgttcttcgtacagccagcaca
gaagctaacaggggaagaaaattcttctcttgtcagacacagggctgcagtttctttgca
tgggaagatagcatcagcaacagtagtgggaatgcaacaacatggtctaatagcagtgga
agcggtagacgtggcagccgtggtcgtggccgtggaggtagaggtggccaaagtggtgga
ggacgacgcggcagtggaacaagcttcgtctcggcaactggagagccagtgagtggtata
aggtgcttctcatgtggggatccttcacattttgctaacgcttgtcctaatcgtaactct
taa
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